| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2165 |
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| Symbol | |
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| ID | 6145397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2169295 |
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| End bp | 2171055 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641617041 |
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| Product | S16 family peptidase |
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| Protein accession | YP_001744215 |
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| Protein GI | 170679870 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000228937 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.352298 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCATTA CGAAACTTGC ATGGCGTGAC CTGGTTCCTG ATACCGATAG CTATCAGGAA
ATATTTGCTC AGCCACATTT GATTGACGAA AACGATCCTT TATTCAGTGA TACTCAACCG
CGACTGCAAT TTGCGCTGGA GCAGTTGCTG CATACGCGAG CATCCTCCTC TTTTATGCTG
GCGAAGGCCC CGGAAGAGTC TGAGTATCTG AATCTTATTG CCGATGCCGC GCGTGCGCTA
CAAAGCGATG CAGGCCAACT GGTGGGCTGT CACTATGAGG TTTCCGGGCA CACCATCCGC
TTACGTAACG CAGTGAGTGC AGATGATAAT TTTGCGACTT TAACGCAAGT TGTCGCTGCC
GACTGGGTAG AAGCGGAACA ACTCTTTGGC TGCCTGCGCC AGTTTAATGG CGACATTACC
CTGCAGCCTG GTCTGGTGCA TCAGGCAAAT GGCGGTATTC TCATCATCTC TTTGCGTACA
CTGCTGGCGC AACCTCTGCT GTGGATGCGG CTGAAAAATA TCGTTAACCG CGAGCGTTTT
GACTGGGTTG CGTTTGATGA GTCGCGCCCT CTCCCCGTCT CTGTGCCTTC GATGCCATTG
AAGCTGAAAG TCATTCTGGT AGGCGAACGT GAATCATTGG CTGATTTCCA GGAGATGGAA
CCAGAGCTTT CAGAGCAGGC TATTTATAGC GAATTTGAAG ATACTCTGCA GATTGTCGAT
GCGGAGTCAG TAAGCCAGTG GTGTCGCTGG GTAACATTGA CCGCAAGACA TAATCACTTA
CCTGCACCGG GAGCGGATGC CTGGCCAGTA CTTATCCGCG AAGCAGCCCG CTACACCGGT
GAACAAGAAA CACTTCCGCT TAGCCCGCAG TGGATCCTCC GCCAGTGTAA AGAGGTCGCC
TCCCTGTGCG ATGGCGACAC CTTCTCCGGC GAGCAGCTAA ACTTAATGCT GCAGCAGCGT
GAATGGCGTG AAGGTTTCCT CGCTGAACGC ATGCAGGATG AGATCCTTCA GGAGCAAATC
CTGATTGAAA CCGAAGGCGA ACGCATCGGG CAAATTAACG CCCTTTCGGT CATTGAATTT
CCGGGTCATC CACGCGCTTT TGGCGAACCT TCTCGCATTA GCTGCGTTGT GCATATTGGC
GATGGTGAAT TCACCGACAT CGAACGCAAA GCGGAGCTTG GCGGCAATAT CCATGCGAAA
GGGATGATGA TCATGCAAGC GTTCCTGATG TCGGAACTAC AGCTTGAGCA ACAGATCCCC
TTCTCAGCAT CGCTGACATT TGAGCAGTCA TACAGTGAAG TGGATGGCGA TAGTGCCTCG
ATGGCTGAAC TCTGCGCCCT GATCAGCGCC CTCGCCGATG TGCCGGTGAA TCAGAGTATC
GCTATCACAG GTTCAGTCGA TCAGTTCGGT CGCGCCCAGC CAGTCGGTGG TTTAAATGAG
AAAATCGAAG GCTTCTTTGC TATTTGCCAG CAACGTGAGT TAACGGGGAA ACAAGGTGTC
ATTATCCCCA CTGCTAACGT TCGCCATTTA AGTCTTCACA GTGAACTGGT GAAAGCGGTA
GAAGAAGGCA AATTCACCAT CTGGGCAGTA GACGATGTGA CTGACGCACT GCCGTTATTA
TTAAATCTGG TGTGGGATGG CGAAGGCCAA ACGACGCTGA TGCAAACCAT CCAGGAACGT
ATCGCACAAG CATCGCAACA GGAAGGACGT CACCGTTTTC CATGGCCATT ACGTTGGCTG
AACTGGTTTA TTCCGAACTG A
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| Protein sequence | MTITKLAWRD LVPDTDSYQE IFAQPHLIDE NDPLFSDTQP RLQFALEQLL HTRASSSFML
AKAPEESEYL NLIADAARAL QSDAGQLVGC HYEVSGHTIR LRNAVSADDN FATLTQVVAA
DWVEAEQLFG CLRQFNGDIT LQPGLVHQAN GGILIISLRT LLAQPLLWMR LKNIVNRERF
DWVAFDESRP LPVSVPSMPL KLKVILVGER ESLADFQEME PELSEQAIYS EFEDTLQIVD
AESVSQWCRW VTLTARHNHL PAPGADAWPV LIREAARYTG EQETLPLSPQ WILRQCKEVA
SLCDGDTFSG EQLNLMLQQR EWREGFLAER MQDEILQEQI LIETEGERIG QINALSVIEF
PGHPRAFGEP SRISCVVHIG DGEFTDIERK AELGGNIHAK GMMIMQAFLM SELQLEQQIP
FSASLTFEQS YSEVDGDSAS MAELCALISA LADVPVNQSI AITGSVDQFG RAQPVGGLNE
KIEGFFAICQ QRELTGKQGV IIPTANVRHL SLHSELVKAV EEGKFTIWAV DDVTDALPLL
LNLVWDGEGQ TTLMQTIQER IAQASQQEGR HRFPWPLRWL NWFIPN
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