Gene EcSMS35_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2148 
Symbol 
ID6143703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2156163 
End bp2156822 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content51% 
IMG OID641617024 
Producthypothetical protein 
Protein accessionYP_001744198 
Protein GI170680785 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0598762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.366892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGTA TTGTTAGTTC TTCACATGAC CGTACATCAC TGCTTAGCAC CCATAAGGTG 
CTGCGTAATA CCTATTTTCT GCTGAGCCTG ACGCTGGCCT TTTCGGCGAT TACCGCAACT
GCCAGTACGG TGCTGATGCT GCCATCTCCG GGTCTGATTC TGACGCTGGT GGGTATGTAT
GGTTTGATGT TCCTGACCTA TAAAACGGCG AATAAGCCGA CCGGGATTAT CTCCGCATTC
GCCTTTACCG GTTTTCTGGG ATATATCCTC GGACCAATTC TGAACACCTA CCTGTCTGCC
GGAATGGGTG ACGTAATCGC TATGGCACTG GGCGGAACGG CGTTAGTGTT CTTCTGCTGC
TCTGCGTATG TGCTGACCAC CCGCAAAGAT ATGTCGTTCC TTGGCGGTAT GCTGATGGCG
GGTATTGTGG TGGTGCTGAT TGGTATGGTT GCTAATATCT TCCTGCAGCT GCCTGCCCTG
CATCTGGCGA TCAGCGCGGT CTTCATTCTG ATCTCCTCTG GCGCTATTTT GTTTGAAACC
AGCAACATCA TTCATGGCGG TGAAACGAAC TATATTCGTG CCACGGTTAG CCTGTATGTT
TCGCTGTACA ACATCTTCGT CAGCCTGCTG AGCATTCTGG GCTTCGCCAG CCGCGATTAA
 
Protein sequence
MDRIVSSSHD RTSLLSTHKV LRNTYFLLSL TLAFSAITAT ASTVLMLPSP GLILTLVGMY 
GLMFLTYKTA NKPTGIISAF AFTGFLGYIL GPILNTYLSA GMGDVIAMAL GGTALVFFCC
SAYVLTTRKD MSFLGGMLMA GIVVVLIGMV ANIFLQLPAL HLAISAVFIL ISSGAILFET
SNIIHGGETN YIRATVSLYV SLYNIFVSLL SILGFASRD