| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2108 |
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| Symbol | putP |
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| ID | 6147531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2115993 |
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| End bp | 2117501 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641616984 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_001744159 |
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| Protein GI | 170682638 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.275652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATTA GCACACCGAT GTTGGTGACA TTTTGTGTCT ATATCTTTGG CATGATATTG
ATTGGGTTTA TCGCCTGGCG ATCAACGAAA AACTTCGACG ACTATATTCT GGGCGGTCGT
AGTCTTGGGC CATTCGTGAC GGCATTATCG GCGGGGGCGT CGGATATGAG CGGCTGGCTG
TTAATGGGGT TGCCAGGCGC TGTTTTTCTT TCCGGGATTT CCGAAAGCTG GATCGCCATT
GGCCTGACAT TAGGCGCGTG GATCAACTGG AAGCTGGTGG CCGGGCGGTT GCGTGTGCAT
ACCGAATACA ACAATAACGC CTTAACATTG CCGGATTATT TCACCGGGCG CTTTGAAGAT
AAAAGCCGCA TTTTGCGCAT TATCTCCGCG CTGGTTATTT TGCTGTTCTT CACCATTTAT
TGCGCTTCGG GCATTGTGGC AGGCGCGCGT CTGTTTGAAA GTACCTTTGG CATGAGCTAC
GAAACGGCTC TGTGGGCGGG GGCTGCGGCG ACGATCCTTT ACACCTTTAT TGGCGGTTTC
CTCGCGGTGA GCTGGACTGA CACTGTACAG GCCAGCCTGA TGATTTTTGC CCTGATCCTG
ACGCCGGTTA TCGTAATCAT TAGCGTTGGT GGGTTTGGCG ACTCTCTGGA AGTGATCAAA
CAAAAGAGCA TCGAAAACGT GGATATGCTC AAAGGGCTGA ACTTTGTCGC CATTATCTCA
CTGATGGGCT GGGGACTGGG TTACTTCGGG CAGCCGCACA TCCTGGCGCG TTTTATGGCG
GCGGATTCTC ACCACAGCAT TGTCCATGCG CGTCGTATCA GTATGACCTG GATGATCCTC
TGCCTGGCAG GGGCGGTGGC TGTCGGCTTC TTTGGTATTG CTTACTTTAA TGAGCACCCG
GCGGTAGCAG GTGCGGTAAA TCAGAACGCT GAACGCGTGT TTATCGAACT GGCGCAAATT
CTGTTTAACC CGTGGATTGC CGGGATTCTG CTGTCGGCGA TTCTGGCGGC GGTAATGTCA
ACCTTAAGCT GCCAGCTGCT GGTATGTTCC AGTGCGATTA CCGAAGATTT ATACAAAGCG
TTTCTGCGTA AACATGCCAG CCAGAAAGAG CTGGTGTGGG TAGGGCGTGT GATGGTGCTG
GTGGTGGCGC TGGTGGCGAT TGCGCTGGCG GCAAACCCGG AAAACCGCGT GCTGGGCTTA
GTGAGCTACG CGTGGGCAGG CTTTGGCGCG GCGTTTGGTC CGGTGGTGCT GTTCTCGGTG
ATGTGGTCAC GCATGACGCG CAACGGTGCG CTGGCGGGGA TGATCATCGG TGCGCTGACG
GTTATCGTCT GGAAACAGTT CGGCTGGCTG GGACTGTACG AAATTATTCC GGGCTTCATC
TTCGGCAGTA TCGGGATTGT AGTGTTTAGT TTGCTGGGTA AAGCGCCGTC AGCGGCGATG
CAAAAACGCT TTGCCGAGGC CGATGCGCAC TATCATTCGG CTCCGCCGTC ACGGTTGCAG
GAAGGGTAA
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| Protein sequence | MAISTPMLVT FCVYIFGMIL IGFIAWRSTK NFDDYILGGR SLGPFVTALS AGASDMSGWL
LMGLPGAVFL SGISESWIAI GLTLGAWINW KLVAGRLRVH TEYNNNALTL PDYFTGRFED
KSRILRIISA LVILLFFTIY CASGIVAGAR LFESTFGMSY ETALWAGAAA TILYTFIGGF
LAVSWTDTVQ ASLMIFALIL TPVIVIISVG GFGDSLEVIK QKSIENVDML KGLNFVAIIS
LMGWGLGYFG QPHILARFMA ADSHHSIVHA RRISMTWMIL CLAGAVAVGF FGIAYFNEHP
AVAGAVNQNA ERVFIELAQI LFNPWIAGIL LSAILAAVMS TLSCQLLVCS SAITEDLYKA
FLRKHASQKE LVWVGRVMVL VVALVAIALA ANPENRVLGL VSYAWAGFGA AFGPVVLFSV
MWSRMTRNGA LAGMIIGALT VIVWKQFGWL GLYEIIPGFI FGSIGIVVFS LLGKAPSAAM
QKRFAEADAH YHSAPPSRLQ EG
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