| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2062 |
|---|
| Symbol | |
|---|
| ID | 6146595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 2080490 |
|---|
| End bp | 2081137 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641616938 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001744114 |
|---|
| Protein GI | 170682009 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3132] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.174673 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATC AACTTACTGC CCTTGAAGCT CGCGTGATTG GTTGCTTGCT GGAAAAGCAG
GTGACCACGC CGGAGCAATA CCCGCTCTCA GTCAATGGTG TAGTCACGGC CTGTAATCAG
AAAACGAACC GTGAACCGGT CATGAATCTG AGTGAATCCG AAGTGCAGGA ACAGCTGGAT
AATCTGGTCA AACGTCATTA TCTACGCACA GTGAGCGGTT TTGGTAATCG GGTCACCAAA
TATGAGCAAC GTTTTTGTAA TTCAGAATTT GGCGATCTGA AACTGAGCGC CGCAGAAGTG
GCGTTAATCA CCACGTTGTT ATTGCGTGGT GCCCAGACGC CGGGTGAACT GCGCAGCCGC
GCCGCGCGAA TGTATGAATT CAGCGATATG GCGGAAGTGG AGTCGACGCT GGAACAACTG
GCAAATCGCG AAGATGGTCC TTTTGTGGTG CGTCTGGCCC GCGAACCGGG TAAACGTGAA
AGCCGCTACA TGCATCTTTT CAGTGGTGAG GTTGAAGATC AGCCGGCGGT GATGGATATG
TCGAACGCGG TTGACGGTGA TTTACAGGCA CGCGTCGAAG CCCTGGAAAT CGAAGTGGCA
GAACTGAAAC AGCGTCTTGA TTCGTTGCTG GCCCATCTGG GAGATTAA
|
|---|
| Protein sequence | MKYQLTALEA RVIGCLLEKQ VTTPEQYPLS VNGVVTACNQ KTNREPVMNL SESEVQEQLD
NLVKRHYLRT VSGFGNRVTK YEQRFCNSEF GDLKLSAAEV ALITTLLLRG AQTPGELRSR
AARMYEFSDM AEVESTLEQL ANREDGPFVV RLAREPGKRE SRYMHLFSGE VEDQPAVMDM
SNAVDGDLQA RVEALEIEVA ELKQRLDSLL AHLGD
|
|---|
| |