Gene EcSMS35_2038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2038 
SymbolrpmF 
ID6144151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2058987 
End bp2059160 
Gene Length174 bp 
Protein Length57 aa 
Translation table11 
GC content54% 
IMG OID641616914 
Product50S ribosomal protein L32 
Protein accessionYP_001744090 
Protein GI170681368 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0333] Ribosomal protein L32 
TIGRFAM ID[TIGR01031] ribosomal protein L32 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.93303e-11 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value2.54001e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCGTAC AACAGAATAA ACCAACCCGT TCCAAACGTG GCATGCGTCG TTCCCATGAC 
GCGCTGACCG CAGTCACCAG CCTGTCTGTA GACAAAACTT CTGGTGAAAA ACACCTGCGT
CACCACATCA CTGCCGACGG TTACTACCGC GGCCGCAAGG TCATCGCTAA GTAA
 
Protein sequence
MAVQQNKPTR SKRGMRRSHD ALTAVTSLSV DKTSGEKHLR HHITADGYYR GRKVIAK