| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2001 |
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| Symbol | potB |
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| ID | 6146436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2022036 |
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| End bp | 2022893 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641616877 |
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| Product | spermidine/putrescine ABC transporter membrane protein |
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| Protein accession | YP_001744053 |
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| Protein GI | 170681466 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.819816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAACA CAAGTAAGTT CCAGAATGTA GTGATTGTCA CTATTGTCGG TTGGCTTGTG
TTGTTTGTCT TTCTGCCCAA CCTGATGATC ATTGGCACCA GCTTTTTGAC CCGCGACGAC
GCCAGTTTCG TCAAAATGGT CTTTACGCTG GATAACTACA CGCGTCTGCT CGATCCGCTC
TATTTTGAAG TGCTATTGCA CTCGCTGAAT ATGGCGCTGA TCGCCACCCT CGCCTGCCTG
GTGCTGGGCT ATCCTTTTGC CTGGTTTCTG GCGAAGTTGC CACACAAGGT GCGTCCGCTG
CTGCTGTTTC TGCTGATTGT TCCGTTCTGG ACCAACTCAT TGATTCGTAT CTACGGGCTG
AAAATTTTCC TCAGCACCAA AGGCTATCTC AACGAGTTTT TGCTCTGGCT GGGCGTTATT
GATACACCAA TTCGCATCAT GTTCACGCCC AGTGCGGTGA TTATCGGTCT GGTTTACATT
CTGCTGCCGT TTATGGTGAT GCCGCTGTAC TCCAGTATCG AAAAACTGGA TAAGCCGTTG
CTTGAGGCGG CGCGCGATCT CGGTGCCAGC AAGTTACAGA CTTTTATCCG CATCATTATT
CCACTGACGA TGCCGGGGAT TATTGCCGGA TGTCTGCTGG TGATGCTGCC AGCGATGGGC
CTGTTCTATG TGTCCGACCT GATGGGCGGT GCGAAAAACC TGCTGATCGG TAACGTCATC
AAGGTACAGT TCCTCAATAT TCGTGACTGG CCGTTTGGTG CAGCCACCAG CATTACGCTG
ACTATCGTAA TGGGCCTGAT GTTGCTGGTT TACTGGCGCG CTTCTCGTTT GCTGAATAAG
AAGGTGGAAC TCGAATGA
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| Protein sequence | MKNTSKFQNV VIVTIVGWLV LFVFLPNLMI IGTSFLTRDD ASFVKMVFTL DNYTRLLDPL
YFEVLLHSLN MALIATLACL VLGYPFAWFL AKLPHKVRPL LLFLLIVPFW TNSLIRIYGL
KIFLSTKGYL NEFLLWLGVI DTPIRIMFTP SAVIIGLVYI LLPFMVMPLY SSIEKLDKPL
LEAARDLGAS KLQTFIRIII PLTMPGIIAG CLLVMLPAMG LFYVSDLMGG AKNLLIGNVI
KVQFLNIRDW PFGAATSITL TIVMGLMLLV YWRASRLLNK KVELE
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