Gene EcSMS35_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1993 
Symbol 
ID6146727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2013879 
End bp2014520 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content57% 
IMG OID641616869 
Producthypothetical protein 
Protein accessionYP_001744045 
Protein GI170682053 
COG category[R] General function prediction only 
COG ID[COG2915] Uncharacterized protein involved in purine metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.934433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAAAGA ATTACTATGA CATCACCCTC GCCCTGGCCG GTATTTGTCA GTCGGCACGC 
CTGGTGCAAC AACTCGCTCA CCAGGGGCAT TGTGATGGCG ATGCGCTACA CGTCTCACTC
AACAGTATTA TCGATATGAA CCCCAGCTCA ACGCTGGCGG TTTTTGGCGG CAGCGAAGCC
AACCTGCGCG TCGGGCTGGA AACCTTGCTC GGCGTACTCA ATGCCAGCAG TCGCCAGGGC
TTAAACGCCG AATTAACCCG CTACACACTC AGTCTGATGG TGCTTGAGCG CAAACTCTCC
TCAGCGAAAG GTGCGCTCGA CACTCTGGGC AACCGGATCA ACGGCCTGCA ACGCCAGCTC
GAACACTTCG ATTTACAGTC CGAAACGCTG ATGAGCGCGA TGGCTGCTAT CTATGTTGAT
GTGATTAGCC CGCTTGGCCC ACGCATTCAG GTCACCGGTT CCCCTGCTGT ACTGCAAAGT
CCACAGGTAC AGGCGAAAGT CCGCGCTACC CTGCTGGCAG GCATTCGCGC CGCCGTGCTC
TGGCACCAGG TCGGCGGCGG ACGTCTGCAA CTGATGTTTT CTCGTAATCG CCTGACCACT
CAGGCAAAAC AAATTCTTGC TCATTTAACC CCGGAGTTGT GA
 
Protein sequence
MAKNYYDITL ALAGICQSAR LVQQLAHQGH CDGDALHVSL NSIIDMNPSS TLAVFGGSEA 
NLRVGLETLL GVLNASSRQG LNAELTRYTL SLMVLERKLS SAKGALDTLG NRINGLQRQL
EHFDLQSETL MSAMAAIYVD VISPLGPRIQ VTGSPAVLQS PQVQAKVRAT LLAGIRAAVL
WHQVGGGRLQ LMFSRNRLTT QAKQILAHLT PEL