Gene EcSMS35_1969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1969 
Symbol 
ID6147024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1992975 
End bp1993634 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content52% 
IMG OID641616845 
Producthypothetical protein 
Protein accessionYP_001744021 
Protein GI170683058 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000105527 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCAAC ATCACAACTG GCAAGGTGCG CTGCTGGATT ATCCGGTGAG TAAAGTAGTC 
TGTGTTGGCA GTAACTATGC CAAACATATT AAAGAGATGG GCAGCGCAGT GCCCGAAGAG
CCAGTGCTGT TTATTAAACC AGAAACGGCA CTGTGCGATC TGCGGCAGCC ATTGGCGATC
CCATCCGATT TCGGTTCAGT TCATCATGAA GTCGAACTGG CGGTGTTGAT TGGCGCGACG
CTGCGTCAGG CTACGGAAGA GCATGTCCGC AAAGCCATTG CCGGTTACGG CGTGGCGCTT
GATCTGACAT TGCGTGATGT TCAGGGAAAA ATGAAGAAAG CCGGGCAGCC GTGGGAAAAG
GCTAAAGCGT TTGATAACTC TTGTCCGCTT TCCGGGTTTA TTCCCGCGGC GGAATTTACC
GGCGATCCAC AAAATACAAC GCTGGGCCTG AGCGTAAACG GCGAACAACG CCAGCAAGGT
ACGACTGTGG ACATGATCCA TAAAATCGTT CCGCTGATCG CTTATATGAG CAAGTTCTTT
ACCCTCAAGG CCGGTGACGT TGTGCTGACA GGCACGCCTG ATGGCGTCGG CCCGTTGCAA
AGCGGTGATG AGCTGACAGT CACTTTCGAT GGGCATTCTT TGACAACTCG CGTTTTGTAA
 
Protein sequence
MYQHHNWQGA LLDYPVSKVV CVGSNYAKHI KEMGSAVPEE PVLFIKPETA LCDLRQPLAI 
PSDFGSVHHE VELAVLIGAT LRQATEEHVR KAIAGYGVAL DLTLRDVQGK MKKAGQPWEK
AKAFDNSCPL SGFIPAAEFT GDPQNTTLGL SVNGEQRQQG TTVDMIHKIV PLIAYMSKFF
TLKAGDVVLT GTPDGVGPLQ SGDELTVTFD GHSLTTRVL