| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1962 |
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| Symbol | fadR |
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| ID | 6146017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1986055 |
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| End bp | 1986774 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641616838 |
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| Product | fatty acid metabolism regulator |
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| Protein accession | YP_001744014 |
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| Protein GI | 170681324 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02812] fatty acid metabolism transcriptional regulator FadR |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000133841 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCATTA AGGCGCAAAG CCCGGCGGGT TTCGCGGAAG AGTACATTAT TGAAAGTATC
TGGAATAACC GCTTCCCTCC CGGGACTATT TTGCCCGCAG AACGTGAACT TTCAGAATTA
ATTGGCGTAA CGCGTACTAC GTTACGTGAA GTGTTACAGC GTCTGGCACG AGATGGCTGG
TTGACCATTC AACATGGCAA GCCGACGAAG GTGAATAATT TCTGGGAAAC CTCCGGTTTA
AATATCCTTG AAACGCTGGC GCGACTGGAT CACGAAAGTG TGCCGCAGCT TATTGATAAT
TTGCTGTCGG TGCGTACCAA TATTTCCACT ATTTTTATTC GCACCGCGTT TCGTCAGCAT
CCCGATAAAG CGCAGGAAGT GCTGGCTACC GCTAATGAAG TGGCCGATCA CGCCGATGCC
TTTGCCGAGC TGGATTACAA CATATTCCGC GGTCTGGCGT TTGCTTCCGG CAACCCGATT
TACGGTCTGA TCCTTAACGG GATGAAAGGG CTGTATACGC GCATTGGTCG TCACTATTTC
GCCAATCCGG AAGCGCGCAG TCTGGCGCTG GGCTTCTACC ACAAACTGTC GGCGTTGTGC
AGTGAAGGCG CACACGATCA GGTATACGAA ACAGTGCGTC GCTATGGGCA TGAGAGCGGC
GAGATTTGGC ACCGGATGCA GAAAAATCTG CCGGGTGATT TAGCCATTCA GGGGCGATAA
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| Protein sequence | MVIKAQSPAG FAEEYIIESI WNNRFPPGTI LPAERELSEL IGVTRTTLRE VLQRLARDGW
LTIQHGKPTK VNNFWETSGL NILETLARLD HESVPQLIDN LLSVRTNIST IFIRTAFRQH
PDKAQEVLAT ANEVADHADA FAELDYNIFR GLAFASGNPI YGLILNGMKG LYTRIGRHYF
ANPEARSLAL GFYHKLSALC SEGAHDQVYE TVRRYGHESG EIWHRMQKNL PGDLAIQGR
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