| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1936 |
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| Symbol | ychM |
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| ID | 6144803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1956292 |
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| End bp | 1957971 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641616812 |
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| Product | putative sulfate transporter YchM |
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| Protein accession | YP_001743988 |
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| Protein GI | 170679649 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
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| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000016191 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.11461 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAAAA TATTTTCCTC ACATGTGATG CCTTTCCGCG CTCTGATCGA CGCTTGCTGG
AAAGAAAAAT ATACTGCCGC ACGGTTTACC CGTGACCTGA TTGCCGGGAT AACCGTCGGG
ATTATTGCTA TCCCGCTGGC GATGGCGTTG GCTATTGGTA GTGGTGTGGC ACCCCAGTAC
GGTTTATATA CCGCAGCTGT TGCGGGGATT GTCATTGCTC TGACGGGGGG GTCACGCTTT
AGCGTTTCCG GTCCGACTGC GGCATTTGTG GTAATTCTCT ATCCCGTTTC GCAACAGTTT
GGACTGGCAG GACTGCTGGT TGCGACCTTG CTGTCGGGGA TCTTTTTGAT TCTGATGGGG
CTGGCACGCT TTGGGCGCCT GATTGAGTAT ATTCCGGTTT CCGTCACCTT AGGTTTCACC
TCGGGTATCG GGATCACCAT CGGTACCATG CAGATTAAAG ATTTTCTCGG TCTGCAAATG
GCCCATGTCC CGGAACATTA TCTACAGAAA GTCGGCGCAT TATTTATGGC GCTGCCGACC
ATTAATGTGG GTGATGCAGC CATTGGCATT GTGACGCTTG GTATTCTGGT TTTCTGGCCG
CGTCTGGGCA TTCGTTTACC CGGTCATCTT CCGGCCTTGC TGGCTGGTTG CGCGGTGATG
GGGATTGTTA ATCTGCTCGG CGGACATGTT GCTACCATCG GTTCGCAATT CCACTACGTC
CTGGCCGATG GTTCTCAGGG TAACGGTATT CCGCAACTGC TGCCGCAACT TGTGCTGCCG
TGGGATCTGC CTGATTCAGA ATTCACGCTA ACCTGGGATT CTATTCGCAC ACTGCTGCCT
GCGGCATTCT CAATGGCAAT GCTCGGCGCA ATCGAATCTC TGCTCTGCGC CGTGGTACTG
GATGGTATGA CCGGAACGAA ACACAAAGCG AACAGCGAAC TGGTTGGACA GGGACTGGGG
AATATTATCG CTCCGTTCTT TGGTGGCATT ACCGCTACAG CTGCCATCGC GCGTTCTGCC
GCTAACGTCC GTGCCGGGGC AACTTCCCCT ATCTCGGCGG TGATCCACTC TATTCTGGTT
ATTCTTGCCC TGCTGGTACT GGCACCGCTG CTCTCCTGGC TGCCGCTTTC CGCCATGGCA
GCCCTGCTGT TGATGGTGGC GTGGAACATG AGTGAAGCGC ACAAAGTGGT CGACTTGCTG
CGTCATGCAC CGAAAGATGA CATCATTGTC ATGCTGTTGT GCATGTCGCT GACCGTGCTG
TTTGATATGG TTATTGCCAT CAGCGTGGGG ATCGTGCTGG CATCGCTGCT GTTTATGCGT
CGTATCGCAC GTATGACTCG CCTGGCACCG GTAGTCGTAG ATGTTCCAGA CGATGTCCTG
GTACTGCGCG TTATTGGCCC GCTGTTTTTT GCTGCTGCTG AAGGCTTATT CACAGACCTG
GAGTCACGTC TTGAAGGCAA ACGGATTGTG ATTCTGAAGT GGGATGCCGT TCCGGTACTT
GATGCTGGTG GTCTTGATGC GTTCCAGCGT TTTGTGAAGC GTCTACCCGA AGGATGTGAA
CTGCGCGTGT GCAACGTGGA ATTCCAGCCA CTGCGCACGA TGGCTCGCGC AGGCATTCAA
CCGATCCCGG GCCGCCTTGC TTTCTTCCCG AATCGTCGCG CGGCGATGGC GGATTTATAA
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| Protein sequence | MNKIFSSHVM PFRALIDACW KEKYTAARFT RDLIAGITVG IIAIPLAMAL AIGSGVAPQY
GLYTAAVAGI VIALTGGSRF SVSGPTAAFV VILYPVSQQF GLAGLLVATL LSGIFLILMG
LARFGRLIEY IPVSVTLGFT SGIGITIGTM QIKDFLGLQM AHVPEHYLQK VGALFMALPT
INVGDAAIGI VTLGILVFWP RLGIRLPGHL PALLAGCAVM GIVNLLGGHV ATIGSQFHYV
LADGSQGNGI PQLLPQLVLP WDLPDSEFTL TWDSIRTLLP AAFSMAMLGA IESLLCAVVL
DGMTGTKHKA NSELVGQGLG NIIAPFFGGI TATAAIARSA ANVRAGATSP ISAVIHSILV
ILALLVLAPL LSWLPLSAMA ALLLMVAWNM SEAHKVVDLL RHAPKDDIIV MLLCMSLTVL
FDMVIAISVG IVLASLLFMR RIARMTRLAP VVVDVPDDVL VLRVIGPLFF AAAEGLFTDL
ESRLEGKRIV ILKWDAVPVL DAGGLDAFQR FVKRLPEGCE LRVCNVEFQP LRTMARAGIQ
PIPGRLAFFP NRRAAMADL
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