| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1928 |
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| Symbol | sirB1 |
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| ID | 6143600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1948966 |
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| End bp | 1949775 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641616804 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001743980 |
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| Protein GI | 170680182 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2912] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0634354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.0610741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATCGT TAGCTGATTT CGAATTTAAT AAAGCGCCAT TGTGCGAAGG CATGATCCTG
GCTTGCGAAG CAATCCGCCG CGATTTTCCC TCGCAAGATG TTTACGACGA ACTGGAGCGT
CTCGTTAGTC TGGCGAAGGA AGAAATCAGC CAGCTTCTGC CTTTAGAAGA ACAGCTGGAA
AAACTGATCG CGCTGTTTTA CGGCGACTGG GGATTTAAAG CCTCACGCGG CGTTTATCGT
CTTTCCGATG CATTATGGCT GGACCAGGTG TTAAAGAATC GACAGGGCAG TGCGGTATCA
TTAGGTGCCG TTTTATTATG GGTCGCGAAT CGTCTCGATT TGCCGCTGCT GCCGGTGATT
TTCCCTACGC AGCTGATATT GCGCATTGAA TGTCCGGATG GCGAAATTTG GCTGATTAAT
CCTTTTAACG GTGAATCGTT AAGTGAACAT ATGCTGGATG TGTGGTTAAA GGGAAATATC
AGCCCGTCGG CGGAACTGTT TTATGAAGAC CTTGATGAAG CTGATAACAT TGAGGTAATC
CGCAAATTGC TGGATACACT CAAAGCCTCG TTGATGGAAG AAAATCAGAT GGAGCTGGCG
CTACGTACCA GCGAAGCTTT ATTACAATTT AACCCGGAAG ATCCCTATGA AATTCGCGAT
CGCGGGTTGA TTTATGCGCA ACTGGATTGC GAACACGTTG CGTTGAACGA TTTAAGTTAT
TTCGTTGAAC AGTGTCCGGA AGACCCGATC AGCGAAATGA TCCGTGCGCA AATAAATAAC
ATCGCGCATA AACATATTGT GCTGCATTAA
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| Protein sequence | MRSLADFEFN KAPLCEGMIL ACEAIRRDFP SQDVYDELER LVSLAKEEIS QLLPLEEQLE
KLIALFYGDW GFKASRGVYR LSDALWLDQV LKNRQGSAVS LGAVLLWVAN RLDLPLLPVI
FPTQLILRIE CPDGEIWLIN PFNGESLSEH MLDVWLKGNI SPSAELFYED LDEADNIEVI
RKLLDTLKAS LMEENQMELA LRTSEALLQF NPEDPYEIRD RGLIYAQLDC EHVALNDLSY
FVEQCPEDPI SEMIRAQINN IAHKHIVLH
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