Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1916 |
Symbol | narK |
ID | 6145199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 1938280 |
End bp | 1939671 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641616792 |
Product | nitrite extrusion protein 1 |
Protein accession | YP_001743968 |
Protein GI | 170682669 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0184588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.196505 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCACT CATCCGCCCC CGAAAGGGCT ACTGGAGCTG TCATTACAGA TTGGCGACCG GAAGATCCTG CGTTCTGGCA ACAACGCGGT CAACGTATTG CCAGCCGCAA CCTGTGGATT TCCGTTCCCT GTCTGCTGCT GGCGTTTTGC GTATGGATGT TGTTCAGCGC TGTTGCGGTG AACTTACCGA AAGTCGGTTT TAATTTTACG ACCGATCAGC TATTTATGTT GACTGCGCTG CCTTCGGTTT CTGGCGCGTT ATTACGTGTT CCATACTCCT TTATGGTTCC TATCTTCGGT GGTCGTCGCT GGACGGCGTT CAGCACCGGT ATTCTGATTA TTCCTTGCGT CTGGCTGGGT TTTGCCGTGC AGGATACCTC CACGCCTTAT AGCGTCTTCA TCATCATCTC TCTGCTGTGC GGCTTTGCTG GCGCGAACTT CGCATCCAGT ATGGCAAACA TCAGCTTCTT CTTTCCGAAA CAGAAGCAGG GTGGCGCGCT GGGTCTGAAT GGTGGTCTGG GCAACATGGG CGTCAGCGTC ATGCAGTTGG TTGCTCCGCT GGTGGTATCA CTGTCGATTT TCGCAGTATT TGGTAGCCAG GGTGTCAAAC AGCCGGATGG GACTGAGCTG TATCTGGCGA ATGCGTCCTG GGTATGGGTG CCGTTCCTTG CCATCTTCAC CATTGCGGCG TGGTTTGGCA TGAACGATCT TGCTACCTCG AAAGCCTCCA TCAAGGAGCA GTTGCCGGTA CTCAAACGGG GTCATCTGTG GATTATGAGC CTGCTGTATC TGGCAACCTT CGGCTCCTTC ATCGGCTTCT CCGCGGGCTT TGCGATGCTG TCAAAAACGC AGTTCCCGGA TGTTCAGATT CTGCAATACG CTTTCTTCGG GCCGTTTATT GGTGCGCTGG CGCGTTCTGC AGGTGGTGCA TTATCTGACC GTCTGGGCGG AACTCGTGTC ACGCTGGTGA ACTTTATCCT GATGGCGATT TTCAGCGGCC TGCTGTTCCT GACCTTACCG ACTGACGGAC AGGGCGGAAG CTTCATGGCG TTCTTCGCAG TCTTCCTGGC GCTGTTCCTG ACAGCTGGGC TGGGTAGTGG TTCCACTTTC CAGATGATTT CCGTGATCTT CCGTAAACTG ACAATGGATC GCGTGAAAGC AGAAGGGGGT TCTGACGAAC GTGCGATGCG TGAAGCGGCA ACCGACACGG CGGCGGCGCT GGGTTTCATC TCTGCGATTG GCGCGATTGG TGGCTTCTTT ATCCCGAAAG CGTTTGGTAG CTCGCTGGCA TTAACGGGTT CGCCAGTCGG CGCAATGAAA GTATTTTTGA TTTTCTATAT CGCCTGCGTG GTGATTACCT GGGCGGTATA TGGTCGGCAT TCTAAAAAAT AA
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Protein sequence | MSHSSAPERA TGAVITDWRP EDPAFWQQRG QRIASRNLWI SVPCLLLAFC VWMLFSAVAV NLPKVGFNFT TDQLFMLTAL PSVSGALLRV PYSFMVPIFG GRRWTAFSTG ILIIPCVWLG FAVQDTSTPY SVFIIISLLC GFAGANFASS MANISFFFPK QKQGGALGLN GGLGNMGVSV MQLVAPLVVS LSIFAVFGSQ GVKQPDGTEL YLANASWVWV PFLAIFTIAA WFGMNDLATS KASIKEQLPV LKRGHLWIMS LLYLATFGSF IGFSAGFAML SKTQFPDVQI LQYAFFGPFI GALARSAGGA LSDRLGGTRV TLVNFILMAI FSGLLFLTLP TDGQGGSFMA FFAVFLALFL TAGLGSGSTF QMISVIFRKL TMDRVKAEGG SDERAMREAA TDTAAALGFI SAIGAIGGFF IPKAFGSSLA LTGSPVGAMK VFLIFYIACV VITWAVYGRH SKK
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