| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1876 |
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| Symbol | ompW |
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| ID | 6145746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1899753 |
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| End bp | 1900391 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641616752 |
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| Product | outer membrane protein W |
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| Protein accession | YP_001743930 |
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| Protein GI | 170682349 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3047] Outer membrane protein W |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00000262717 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAGT TAACAGTGGC GGCTTTGGCA GTAACAACTC TTCTCTCTGG CAGTGCCTAT
GCGCATGAAG CAGGCGAATT TTTTATGCGT GCAGGGTCTG CAACCGTACG TCCAACAGAA
GGTGCTGGTG GTACGTTAGG AAGTCTGGGT GGATTCAGCG TGACCAATAA CACGCAACTG
GGCCTGACGT TTACTTATAT GGCGACCGAC AACATTGGTG TGGAATTACT GGCTGCGACG
CCGTTCCGCC ATAAAATCGG CACCCGGGCG ACCGGCGATA TTGCAACCGT TCATCATCTG
CCGCCAACAC TGATGGCGCA GTGGTATTTT GGTGATGCCA GCAGCAAATT CCGTCCTTAC
GTTGGGGCAG GTATTAACTA CACCACCTTC TTTGATAATG GATTTAACGA TCATGGCAAA
GAGGCGGGGC TTTCCGATCT CAGTCTGAAA GATTCCTGGG GAGCTGCCGG GCAGGTGGGG
GTTGATTATC TGATTAACCG TGACTGGTTG GTTAACATGT CAGTGTGGTA CATGGATATC
GATACCACCG CCAATTATAA ACTGGGCGGT GCACAGCAAC ACGATAGCGT ACGCCTCGAT
CCGTGGGTGT TTATGTTCTC AGCAGGATAT CGTTTTTAA
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| Protein sequence | MKKLTVAALA VTTLLSGSAY AHEAGEFFMR AGSATVRPTE GAGGTLGSLG GFSVTNNTQL
GLTFTYMATD NIGVELLAAT PFRHKIGTRA TGDIATVHHL PPTLMAQWYF GDASSKFRPY
VGAGINYTTF FDNGFNDHGK EAGLSDLSLK DSWGAAGQVG VDYLINRDWL VNMSVWYMDI
DTTANYKLGG AQQHDSVRLD PWVFMFSAGY RF
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