Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1867 |
Symbol | |
ID | 6146003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 1890311 |
End bp | 1891192 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641616743 |
Product | putative phosphoesterase |
Protein accession | YP_001743921 |
Protein GI | 170681023 |
COG category | [R] General function prediction only |
COG ID | [COG0613] Predicted metal-dependent phosphoesterases (PHP family) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000000000652478 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGAGCGACA CGAATTACGC AGTGATTTAC GACCTGCACA GCCATACCAC AGCTTCCGAT GGCTGCCTGA CGCCAGAAGC ATTGGTGCGC CGTGCAGTCG AGATGCGCGT CGGCACCCTG GCGATCACCG ACCATGACAC CACAGCTGCA ATTGCACCAG CAAGAGAGGA AATTTCACGT TCGGGACTGG CGCTGAATCT TATTCCCGGC GTGGAAATTT CCACGGTCTG GGAAAATCAT GAAATTCATA TTGTCGGGCT GAATATTGAT ATTACTCATC CGCTAATGTG TGAGTTCCTC GCGCAGCAGA CAGAACGGCG CAATCAGCGG GCGCAGCTGA TTGCCGAAAG ACTTGAAAAA GCGCAAATAC CTGGGGCACT GGAAGGCGCG CAACGACTGG CGCAGGGCGG TGCGGTGACG CGCGGTCATT TTGCTCGTTT CCTTGTGGAG TGCGGCAAAG CCAGTTCAAT GGCGGATGTC TTTAAAAAAT ATCTGGCGCG CGGGAAAACC GGATACGTTC CGCCACAGTG GTGTACAATA GAACAAGCTA TTGATGTCAT TCATCATTCT GGCGGTAAGG CGGTGCTAGC TCATCCTGGG CGGTACAATC TTAGTGCTAA ATGGCTGAAA AGATTGGTTG CGCATTTTGC TGAACACCAC GGCGACGCGA TGGAAGTCGC GCAGTGCCAG CAATCGCCCA ATGAACGCAC CCAGCTGGCG ACACTTGCGC GTCAGCATCA TTTATGGGCA TCACAAGGAT CTGATTTTCA TCAGCCATGC CCGTGGATCG AACTGGGTCG TAAACTCTGG CTGCCCGCAG GCGTTGAAGG CGTCTGGCAG CTATGGGAAC AGCCGCAGAA CACCACAGAG AGGGAATTAT GA
|
Protein sequence | MSDTNYAVIY DLHSHTTASD GCLTPEALVR RAVEMRVGTL AITDHDTTAA IAPAREEISR SGLALNLIPG VEISTVWENH EIHIVGLNID ITHPLMCEFL AQQTERRNQR AQLIAERLEK AQIPGALEGA QRLAQGGAVT RGHFARFLVE CGKASSMADV FKKYLARGKT GYVPPQWCTI EQAIDVIHHS GGKAVLAHPG RYNLSAKWLK RLVAHFAEHH GDAMEVAQCQ QSPNERTQLA TLARQHHLWA SQGSDFHQPC PWIELGRKLW LPAGVEGVWQ LWEQPQNTTE REL
|
| |