| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1824 |
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| Symbol | puuD |
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| ID | 6145147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1843851 |
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| End bp | 1844603 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641616700 |
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| Product | gamma-glutamyl-gamma-aminobutyrate hydrolase |
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| Protein accession | YP_001743878 |
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| Protein GI | 170679609 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2071] Predicted glutamine amidotransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.0824878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAATC CGGTTATCGG TGTCGTAATG TGCAGGAACA GGCTTAAGGG TCATGCGACC
CAGACTCTGC AAGAAAAGTA CCTGAATGCC ATCATCCACG CAGGCGGTTT GCCAATAGCG
CTACCACATG CGCTGGCGGA ACCGTCGTTA CTTGAACAAC TTTTGCCGAA ACTCGATGGT
ATTTATCTTC CTGGTAGTCC CAGCAATGTG CAGCCGCACC TATATGGTGA AAACGGCGAT
GAGCCTGACG CCGATCCCGG GCGTGATCTT CTGAGCATGG CGTTAATTAA TGCCGCACTC
GAAAGGCGCA TCCCCATTTT CGCCATCTGC CGGGGTTTAC AGGAACTGGT GGTGGCAACC
GGTGGTTCGT TGCATCGCAA GCTGTGCGAA CAGCCTGAAT TGCTGGAACA TCGGGAAGAT
CCCGAACTGC CGGTGGAGCA GCAATATGCA CCGTCGCATG AAGTTCAGGT TGAAGAGGGG
GGATTGCTGT CTGCGTTGTT ACCTGAATGT AGCAACTTTT GGGTAAACTC TCTGCATGGA
CAAGGGGCGA AGGTCGTTAG CCCACGGTTG CGTGTTGAAG CTCGCTCGCC GGATGGCTTA
GTTGAGGCGG TTAGCGTCAT CAATCATCCT TTTGCGCTGG GCGTACAGTG GCACCCGGAG
TGGAACAGTA GCGAGTACGC GCTTTCGCGT ATATTGTTCG AGGGCTTTAT CACCGCTTGT
CAGCACCATA TCGCTGAAAA ACAGCGACTC TGA
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| Protein sequence | MNNPVIGVVM CRNRLKGHAT QTLQEKYLNA IIHAGGLPIA LPHALAEPSL LEQLLPKLDG
IYLPGSPSNV QPHLYGENGD EPDADPGRDL LSMALINAAL ERRIPIFAIC RGLQELVVAT
GGSLHRKLCE QPELLEHRED PELPVEQQYA PSHEVQVEEG GLLSALLPEC SNFWVNSLHG
QGAKVVSPRL RVEARSPDGL VEAVSVINHP FALGVQWHPE WNSSEYALSR ILFEGFITAC
QHHIAEKQRL
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