| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1756 |
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| Symbol | gapC |
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| ID | 6143907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1760214 |
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| End bp | 1761215 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641616632 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) |
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| Protein accession | YP_001743810 |
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| Protein GI | 170680304 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000000000000557721 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAAAG TTGGTATTAA CGGTTTTGGT CGTATCGGTC GACTGGTGTT GCGTCGATTA
CTTGAAGTCA AAAGCAACAT AGACATTGTT GCTATTAATG ATCTCACTTC CCCAAAAATT
CTCGCCTACC TGTTGAAACA TGATTCAAAC TACGGACCGT TCCCCTGGAG CGTTGATTTT
ACGGAAGATT CACTTATCGT TGATGGAAAA AGTATCGCGG TTTACGCCGA AAAAGAGGCT
AAAAATATTC CATGGAAAGC GAAAGGCGCA GAAATCATTG TCGAATGTAC TGGCTTTTAT
ACCTCCGCCG AGAAATCGCA GGCGCACCTT GATGCTGGTG CGAAGAAGGT GTTGATTTCC
GCCCCTGCCG GTGAAATGAA AACCATCGTT TATAACGTCA ATGACGACAC ACTGGATGGC
AACGACACCA TTGTTTCCGT GGCGTCATGC ACCACTAACT GTCTTGCACC GATGGCCAAA
GCCTTGCACG ACAGTTTCGG AATAGAAGTC GGCACGATGA CGACCATTCA TGCCTATACC
GGCACTCAGT CACTGGTGGA TGGTCCGCGA GGTAAAGATC TACGCGCTTC ACGTGCAGCG
GCAGAAAATA TCATTCCCCA CACTACAGGT GCGGCAAAAG CCATTGGTCT GGTGATCCCG
GAACTGAGCG GCAAACTGAA AGGTCATGCG CAACGCGTGC CGGTGAAAAC AGGTTCGGTC
ACTGAGCTGG TGTCCATTCT CGGAAAAAAA GTGACTGCCG AAGAGGTGAA TAACGCACTT
AAACAAGCAA CCACCAATAA CGAGTCATTT GGTTATACCG ATGAAGAAAT AGTCTCTTCC
GATATCATTG GCAGCCATTT CGGTTCGGTG TTTGATGCCA CGCAAACGGA AATTACCGCC
GTGGGCGATT TACAACTGGT GAAAACGGTC GCCTGGTACG ATAACGAATA TGGCTTCGTC
ACACAGCTCA TTCGCACCCT CGAAAAATTC GCTAAACTCT GA
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| Protein sequence | MSKVGINGFG RIGRLVLRRL LEVKSNIDIV AINDLTSPKI LAYLLKHDSN YGPFPWSVDF
TEDSLIVDGK SIAVYAEKEA KNIPWKAKGA EIIVECTGFY TSAEKSQAHL DAGAKKVLIS
APAGEMKTIV YNVNDDTLDG NDTIVSVASC TTNCLAPMAK ALHDSFGIEV GTMTTIHAYT
GTQSLVDGPR GKDLRASRAA AENIIPHTTG AAKAIGLVIP ELSGKLKGHA QRVPVKTGSV
TELVSILGKK VTAEEVNNAL KQATTNNESF GYTDEEIVSS DIIGSHFGSV FDATQTEITA
VGDLQLVKTV AWYDNEYGFV TQLIRTLEKF AKL
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