| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1720 |
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| Symbol | |
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| ID | 6144855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1728170 |
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| End bp | 1730272 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641616596 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001743774 |
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| Protein GI | 170680750 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.000201404 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGATTT TTTCCGTCCG ACAGACCGTT TTGCCCGCAC TGCTTGTCCT TTCCCCCGTT
GTTTTTGCCG CTGATGAACA GACCATGATT GTCAGTGCCG CGCCGCAGGT GGTTTCAGAA
CTGGATACGC CAGCAGCAGT AAGCGTGGTG GATGGCGAGG AGATGCGCCT GGCAACACCG
CGCATTAACT TGTCTGAATC ACTGACTGGC GTGCCTGGTT TGCAGGTACA AAACCGGCAG
AACTATGCGC AAGATTTACA GCTGTCGATT CGCGGATTTG GCTCCCGCTC CACTTACGGA
ATTCGCGGTA TTCGCCTGTA TGTGGACGGT ATTCCCGCCA CCATGCCCGA CGGGCAAGGG
CAAACATCCA ACATCGATTT AAGCAGTGTG CAAAATGTGG AAGTGCTGCG TGGCCCCTTC
TCTGCTCTGT ATGGCAACGC GTCTGGCGGT GTAATGAATG TCATCACCCA GACCGGACAA
CAGCCACCAA CCATTGAAGC CAGTAGTTAC TACGGCAGTT TTGGCAGCTG GCGCTATGGG
CTGAAAGCAA CAGGCGCAAC GGGCGACGGC ACACAGCCTG GCGATGTCGA TTACACCGTC
TCAACCACGC GTTTTACGAC CCACGGCTAT CGTGACCATA GTGGCGCACA GAAAAATTTA
GCCAATGCCA AACTGGGCGT TCGCATTGAT GAAGCCAGCA AATTAAGCCT GATTTTCAAT
AGTGTGGATA TCAAAGCAGA TGACCCAGGT GGGCTAACCG AAGCAGAATG GAAGGCGAAT
CCGCAACAAG CGCCACGCGC TGAACAGTAC GACACGCGAA AAACCATCAA GCAAACTCAG
GCTGGGTTGC GCTATGAACG TAGCCTGAGC GCGCAAGATG ATATGAGTGT AATGATGTAT
GCCGGAGAGC GAGAAACGAC CCAGTACCAG TCAATCCCGA TGGCCCCTCA ACTTAATCCG
TCGCATGCGG GCGGCGTGAT TACTCTGCAA CGCCATTATC AGGGGATAGA CAGCCGCTGG
ACACACCATG GCGAGCTGGG TGTTCCGGTC ACGTTCACTA CTGGCCTGAA CTACGAAAAC
ATGAGTGAAA ACCGCAAGGG CTACAATAAC TTCCGCCTGA ATAGCGGCGT GCCGGAATAC
GGGCAAAAAG GTGAGTTACG TCGCGACGAA CGCAATCTGA TGTGGAATGT CGATCCCTAT
TTACAGACAC AGTGGCAGCT GAGCGAAAAA CTGTCGCTGG ATGCTGGCGT GCGCTACAGC
TCCGTATGGT TTGATTCCAA CGACCATTAC GTTACTCCGG GTAACGGCGA TGACAGCGGT
GATGCCAGTT ATCACAAATG GCTACCTGCC GGTTCGTTAA AATATGCAAT GAACGATGCC
TGGAATATCT ATCTGGCAGC CGGGCGTGGT TTTGAAACGC CGACGATTAA TGAACTGTCT
TATCGCGCTG ATGGGCAAAG CGGTATGAAC TTTGGTTTAA AACCATCTAC CAACGATACA
ATTGAGATCG GCAGTAAAAC GCGTATTGGT GATGGGCTGC TGAGTCTCGC ATTGTTCCAG
ACCGACACCG ATGATGAAAT TGTTGTCGAT AGCAGTAGCG GTGGGCGTAC CACATATAAA
AATGCCGGAA AGACCCGTCG TCAAGGCGCT GAACTGGCAT GGGATCAACG TTTCGCGGGA
GATTTTCGCG TAAAAGCGTC CTGGACCTGG CTTGATGCGA CCTATCGCAG CAATGTGTGC
AATGAACAGG ATTGTAACGG TAACCGGATG CCAGGGATCG CCCGTAATAT GGGCTTTGCA
TCGATAGGTT ATGTACCGGA AGAAGGCTGG TATGCAGGCA CGGAAGCGCG ATATATGGGC
GATATTATGG CAGATGATGA AAATACGGCC AAAGCGCCGT CTTATACTCT CGTCGGCTTA
TTCACCGGGT ATAAATACAA TTACCACAAT TTGACTGTGG ATTTATTTGG TCGTGTCGAT
AATTTATTCG ATAAAGGATA CGTTGGTTCT GTCATTGTCA ATGAGTCAAA CGGTCGATAT
TACGAACCTG CGCCCGGGCG AAATTATGGT GTCGGCATGA ATATTGCGTG GCGATTTGAG
TAA
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| Protein sequence | MKIFSVRQTV LPALLVLSPV VFAADEQTMI VSAAPQVVSE LDTPAAVSVV DGEEMRLATP
RINLSESLTG VPGLQVQNRQ NYAQDLQLSI RGFGSRSTYG IRGIRLYVDG IPATMPDGQG
QTSNIDLSSV QNVEVLRGPF SALYGNASGG VMNVITQTGQ QPPTIEASSY YGSFGSWRYG
LKATGATGDG TQPGDVDYTV STTRFTTHGY RDHSGAQKNL ANAKLGVRID EASKLSLIFN
SVDIKADDPG GLTEAEWKAN PQQAPRAEQY DTRKTIKQTQ AGLRYERSLS AQDDMSVMMY
AGERETTQYQ SIPMAPQLNP SHAGGVITLQ RHYQGIDSRW THHGELGVPV TFTTGLNYEN
MSENRKGYNN FRLNSGVPEY GQKGELRRDE RNLMWNVDPY LQTQWQLSEK LSLDAGVRYS
SVWFDSNDHY VTPGNGDDSG DASYHKWLPA GSLKYAMNDA WNIYLAAGRG FETPTINELS
YRADGQSGMN FGLKPSTNDT IEIGSKTRIG DGLLSLALFQ TDTDDEIVVD SSSGGRTTYK
NAGKTRRQGA ELAWDQRFAG DFRVKASWTW LDATYRSNVC NEQDCNGNRM PGIARNMGFA
SIGYVPEEGW YAGTEARYMG DIMADDENTA KAPSYTLVGL FTGYKYNYHN LTVDLFGRVD
NLFDKGYVGS VIVNESNGRY YEPAPGRNYG VGMNIAWRFE
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