Gene EcSMS35_1712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1712 
Symbol 
ID6145607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1720145 
End bp1720714 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content52% 
IMG OID641616588 
Productflavin reductase domain-containing protein 
Protein accessionYP_001743766 
Protein GI170681909 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.190889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0473113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGAT TCATCCCCGT CGAATTACAC CATGCCAGCC GTCTGTTAAA TCATGGCCCA 
ACTGTCATGA TCACCAGTTT CGATGAGCAA TCCCAGCGGC GTAACATTAT GGCTGCAGCC
TGGTCAATGC CGGTGGAGTT TGAACCGCCA CGCGTCGCGA TTGTGGTAGA TAAATCGACA
TGGACCAGGG AGTTGATTGA ACGTAACGGT AAATTTGGCA TCGTTATCCC GGGCGTTGCA
GCAACTAACT GGACGTGGGC GGTGGGAAGT GTGTCGGGGC GTGATGAAGA TAAGTTTAAT
TGCTATGGTA TTCCGGTTGT GAAAGGCCCG GTGCTTGGTT TGCCGCTGGT CGAGGAAAAA
TGTCTGGCGT GGATGGAGTG TCGCCTGCTA CCTGCAACTT CCGCGCAAGA AAAATACGAT
TCGCTATTTG GCGAAGTGGT ATCTGCAGCG GCAGACGTAC GGGTATTTGT CGAAGGCCGC
TGGCAGTTTG ATGATGATAA GCTCAATACG TTGCATCATT TAGGCGCTGG CACGTTTGTT
ACCAGCGGCA AGCGTGTTAC GGCAGGTTAA
 
Protein sequence
MSRFIPVELH HASRLLNHGP TVMITSFDEQ SQRRNIMAAA WSMPVEFEPP RVAIVVDKST 
WTRELIERNG KFGIVIPGVA ATNWTWAVGS VSGRDEDKFN CYGIPVVKGP VLGLPLVEEK
CLAWMECRLL PATSAQEKYD SLFGEVVSAA ADVRVFVEGR WQFDDDKLNT LHHLGAGTFV
TSGKRVTAG