| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1705 |
|---|
| Symbol | narU |
|---|
| ID | 6143194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1709920 |
|---|
| End bp | 1711308 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641616581 |
|---|
| Product | nitrite extrusion protein 2 |
|---|
| Protein accession | YP_001743759 |
|---|
| Protein GI | 170682066 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2223] Nitrate/nitrite transporter |
|---|
| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0635768 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTGC AAAATGAGAA AAATAGTCGT TATCTTTTAC GCGACTGGAA ACCAGAAAAT
CCGGCCTTCT GGGAAAATAA AGGAAAACAT ATTGCACGAA GAAACCTCTG GATATCAGTC
AGTTGTCTAC TTCTTGCCTT CTGTGTCTGG ATGCTATTTA GCGCAGTTAC TGTTAATCTC
AATAAAATCG GTTTTAATTT CACTACCGAT CAACTCTTTT TATTAACCGC ATTACCCTCC
GTTTCTGGCG CATTATTGCG TGTCCCCTAC TCCTTTATGG TGCCTATATT CGGTGGACGC
CGATGGACGG TTTTTAGTAC TGCAATCCTG ATTATTCCTT GCGTCTGGCT CGGAATTGCC
GTGCAGAATC CGAATACTCC TTTTGGGATA TTTATCGTTA TCGCTTTGCT ATGCGGTTTT
GCAGGTGCGA ACTTTGCTTC GAGCATGGGC AATATCAGTT TCTTCTTCCC AAAAGCCAAA
CAAGGGAGCG CACTTGGGAT TAATGGCGGA TTAGGAAACT TAGGTGTAAG TGTGATGCAG
CTGGTTGCAC CGCTGGTCAT TTTTGTACCC GTATTTGCCT TTCTCGGCGT CAATGGCGTA
CCGCAGGCCG ACGGTTCGGT AATGTCGCTG GCGAATGCCG CATGGATTTG GGTGCCATTA
CTGGCGATTG CCACGATCGC CGCCTGGTCA GGGATGAATG ATATCGCCAG TTCACGCGCG
TCAATTGCCG ACCAGCTGCC AGTGTTACAA CGCCTGCATC TCTGGCTGCT GAGCCTGCTT
TACCTTGCCA CCTTCGGTTC GTTTATCGGT TTTTCTGCGG GTTTTGCCAT GCTGGCGAAA
ACTCAGTTCC CGGATGTGAA TATTCTGCGC CTGGCGTTCT TTGGCCCATT TATCGGTGCC
ATCGCGCGAT CGCTTGGTGG TGCTATTTCC GATAAATTCG GCGGCGTGCG GGTGACGTTG
ATCAACTTCA TTTTTATGGC GATTTTCAGC GCCCTGCTGT TCCTTACCTT ACCGGGCACA
GGCTCCGGTA ATTTCATCGC ATTTTACGCC GTATTTATGG GGCTGTTTCT GACCGCGGGT
CTGGGAAGTG GTTCTACTTT CCAGATGATC GCCGTCATCT TTCGCCAGAT AACCATTTAT
CGGGTGAAGA TGAAAGGCGG TAGTGATGAG CAAGCTCAAA GAGAAGCCGT CACCGAAACG
GCAGCCGCTC TGGGCTTTAT CTCAGCCATT GGCGCAGTGG GCGGCTTTTT TATTCCGCAG
GCGTTTGGCA TGTCGCTCAA TATGACCGGC TCTCCGGTGG GCGCGATGAA AGTGTTTTTA
ATCTTCTACA TCGTTTGTGT GCTGCTGACC TGGCTGGTTT ATGGTCGGCG GAAGTTCAGC
CAAAAATAA
|
|---|
| Protein sequence | MALQNEKNSR YLLRDWKPEN PAFWENKGKH IARRNLWISV SCLLLAFCVW MLFSAVTVNL
NKIGFNFTTD QLFLLTALPS VSGALLRVPY SFMVPIFGGR RWTVFSTAIL IIPCVWLGIA
VQNPNTPFGI FIVIALLCGF AGANFASSMG NISFFFPKAK QGSALGINGG LGNLGVSVMQ
LVAPLVIFVP VFAFLGVNGV PQADGSVMSL ANAAWIWVPL LAIATIAAWS GMNDIASSRA
SIADQLPVLQ RLHLWLLSLL YLATFGSFIG FSAGFAMLAK TQFPDVNILR LAFFGPFIGA
IARSLGGAIS DKFGGVRVTL INFIFMAIFS ALLFLTLPGT GSGNFIAFYA VFMGLFLTAG
LGSGSTFQMI AVIFRQITIY RVKMKGGSDE QAQREAVTET AAALGFISAI GAVGGFFIPQ
AFGMSLNMTG SPVGAMKVFL IFYIVCVLLT WLVYGRRKFS QK
|
|---|
| |