| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1686 |
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| Symbol | |
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| ID | 6145053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1689668 |
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| End bp | 1691218 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641616562 |
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| Product | putative ABC transporter periplasmic-binding protein yddS precursor |
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| Protein accession | YP_001743740 |
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| Protein GI | 170681069 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGAT CGATTTTGTT TCGTCCTACA TTGCTCGCGA TCGTCCTTGC CACAACAATG
CCGGTTGCGC ACGCCGCCGT ACCGAAAGAT ATGCTGGTGA TCGGTAAAGC TGCCGACCCA
CAAACCCTCG ACCCAGCGGT GACAATTGAT AATAACGACT GGACAGTGAC CTACCCGTCT
TATCAGCGAC TGGTTCAGTA CAAAACGGAC GGTGATAAAG GCTCAACCGA CGTTGAAGGC
GATCTGGCAA GTAGCTGGAA AGCGTCTGAC GATCAAAAAG AGTGGACGTT CACCCTGAAA
AACGACGCTA AATTTGCCGA TGGCACACCT GTCACTGCCG AAGCAGTAAA ACTCTCTTTT
GAGCGGTTAC TAAAAATCGG CCAGGGGCCA GCAGAAGCAT TTCCCAAAGA TTTAAAGATT
GATGCTCCCG ACGAACATAC AGTGAGGTTT ACCCTTAGCC AGCCATTCGC ACCGTTCCTC
TACACGCTGG CGAATGACGG TGCATCCATT ATCAATCCGG CGGTCTTAAA GGAGCATGCG
GCGGATGATG CCCGTGGTTT CCTCGCGCAA AATACCGCTG GCTCCGGACC GTTTATGCTG
AAAAGCTGGC AAAAAGGTCA GCAATTAGTT CTGGTGCCAA ATCCGCATTA CCCCGGCAAT
AAACCGAATT TCAAACGGGT ATCGGTAAAA ATTATCGGTG AAAGTGCTTC CCGTCGCCTG
CAGCTCTCCC GTGGCGACAT TGACATTGCC GATGCGCTGC CGGTGGATCA ACTCAACGCA
CTGAAGCAGG AAAACAAAGT CAATGTGGCA GAGTATCCGT CACTGCGCGT CACCTATCTG
TATCTGAATA ACAGCAAAGC GCCACTTAAT CAGGCGGATC TGCGTCGGGC CATTTCCTGG
TCTACCGATT ATCAGGGTAT GGTTAACGGC ATTCTGAGTG GTAACGGAAA ACAAATGCGC
GGCCCGATTC CGGAAGGCAT GTGGGGATAC GATGCGACGG CAATGCAATA CAACCATGAC
GAAACGAAAG CCAAAGCCGA ATGGGATAAA GTGACGAGCA AACCCACCAG CCTGACGTTT
CTCTATTCTG ATAATGATCC GAACTGGGAG CCTATTGCTC TGGCGACACA ATCCAGTCTC
AACAAGCTGG GCATCAATGT GAAGCTGGAA AAGCTGGCGA ACGCCACCAT GCGCGACAGA
GTGGGTAAAG GTGATTACGA CATCGCGATT GGCAACTGGA GTCCGGATTT TGCCGACCCG
TATATGTTTA TGAATTACTG GTTTGAGTCC GACAAAAAAG GTCTGCCGGG TAACCGCTCG
TTCTATGAAA ACAGTGAGGT CGATAAGTTA CTGCGCAATG CGCTAGCGAC CACCGACCAG
ACGCAGCGTA CCCGGGACTA CCAGCAGGCA CAGAAAATCG TCATTGATGA CGCTGCTTAT
GTGTATCTGT TCCAGAAAAA CTACCAACTG GCGATGAACA AAGAGGTGAA AGGCTTTGTG
TTCAATCCCA TGCTGGAACA GGTCTTCAAT ATCAATACCA TGAGTAAATA A
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| Protein sequence | MKRSILFRPT LLAIVLATTM PVAHAAVPKD MLVIGKAADP QTLDPAVTID NNDWTVTYPS
YQRLVQYKTD GDKGSTDVEG DLASSWKASD DQKEWTFTLK NDAKFADGTP VTAEAVKLSF
ERLLKIGQGP AEAFPKDLKI DAPDEHTVRF TLSQPFAPFL YTLANDGASI INPAVLKEHA
ADDARGFLAQ NTAGSGPFML KSWQKGQQLV LVPNPHYPGN KPNFKRVSVK IIGESASRRL
QLSRGDIDIA DALPVDQLNA LKQENKVNVA EYPSLRVTYL YLNNSKAPLN QADLRRAISW
STDYQGMVNG ILSGNGKQMR GPIPEGMWGY DATAMQYNHD ETKAKAEWDK VTSKPTSLTF
LYSDNDPNWE PIALATQSSL NKLGINVKLE KLANATMRDR VGKGDYDIAI GNWSPDFADP
YMFMNYWFES DKKGLPGNRS FYENSEVDKL LRNALATTDQ TQRTRDYQQA QKIVIDDAAY
VYLFQKNYQL AMNKEVKGFV FNPMLEQVFN INTMSK
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