| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1681 |
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| Symbol | gadC |
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| ID | 6144205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1681648 |
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| End bp | 1683183 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641616557 |
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| Product | glutamate:gamma aminobutyrate antiporter |
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| Protein accession | YP_001743735 |
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| Protein GI | 170679725 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00910] glutamate:gamma-aminobutyrate antiporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACAT CAGTACAGAC AGGTAAAGCT AAGCAGCTCA CATTACTCGG ATTCTTTGCC
ATAACGGCAT CGATGGTAAT GGCTGTTTAT GAATACCCTA CCTTCGCAAC ATCGGGCTTT
TCATTAGTCT TCTTCCTGCT ATTAGGCGGG ATTTTATGGT TTATTCCCGT GGGACTTTGT
GCTGCGGAAA TGGCTACCGT CGACGGCTGG GAAGAAGGTG GCGTCTTCGC CTGGGTATCA
AATACTTTGG GGCCGAGATG GGGATTTGCA GCGATCTCAT TTGGTTATCT GCAAATCGCC
ATTGGTTTTA TTCCGATGCT CTATTTCGTG TTAGGGGCAC TCTCCTACAT CCTGAAATGG
CCAGCGCTGA ATGAAGACCC CATTACCAAA ACTATTGCAG CACTCATCAT TCTTTGGGCG
CTGGCATTAA CGCAGTTTGG TGGCACGAAA TACACGGCGC GCATTGCTAA AGTTGGCTTC
TTCGCCGGTA TCCTGTTACC TGCATTTATT TTGATCGCAT TAGCGGCTAT TTATCTGCAC
TCCGGTGCCC CCGTTGCTAT CGAAATGGAT GCGAAGACCT TCTTCCCTGA CTTCTCTAAA
GTGGGCACCC TGGTTGTATT TGTTGCCTTC ATTTTGAGTT ATATGGGCGT TGAAGCTTCC
GCAACCCACG TCAATGAAAT GAGCAACCCC GGGCGCGACT ATCCACTGGC TATGTTACTG
CTGATGGTAG CGGCAATCTG CTTAAGCTCT GTTGGCGGTT TGTCTATTGC GATGGTCATT
CCGGGTAATG AAATCAACCT CTCCGCAGGG GTAATGCAAA CCTTTACCGT TCTGATGTCA
CATGTGGCAC CGGAAATTGA GTGGACGGTT CGCGTGATCT CCGCACTGCT GTTGCTGGGT
GTTCTGGCGG AAATCGCTTC CTGGATTGTT GGTCCTTCTC GCGGGATGTA TGTCACAGCG
CAGAAAAACC TGCTGCCAGC AGCATTCGCT AAAATGAACA AAAATGGCGT ACCGGTAACG
CTGGTCATTT CGCAGCTGGT GATTACTTCT ATCGCGTTGA TCATCCTCAC CAATACCGGT
GGCGGTAACA ACATGTCCTT CCTGATCGCA CTGGCACTGA CGGTGGTGAT TTATCTGTGT
GCTTATTTCA TGCTGTTTAT TGGCTACATT GTGTTGGTTC TTAAACATCC TGACTTAAAA
CGCACATTTA ATATCCCTGG TGGTAAAGGG GTGAAACTGG TCGTGGCTAT TGTCGGTCTG
CTGACTTCAA TTATGGCGTT TATTGTTTCC TTCCTGCCGC CGGATAACAT CCAGGGTGAC
TCTACCGATA TGTATGTTGA ATTACTGGTC GTGAGTTTCC TGGTGGTACT TGCCCTGCCC
TTTATTCTCT ATGCTGTTCA TGATCGTAAA GGCAAAGGGA ATACCGGCGT TACTCTGGAG
CCAATCAACA GTCAGAACGC ACCAAAAGGT CACTTCTTCC TGCACCCGCG TGCACGTTCA
CCACACTATA TTGTGATGAA TGACAAGAAA CACTAA
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| Protein sequence | MATSVQTGKA KQLTLLGFFA ITASMVMAVY EYPTFATSGF SLVFFLLLGG ILWFIPVGLC
AAEMATVDGW EEGGVFAWVS NTLGPRWGFA AISFGYLQIA IGFIPMLYFV LGALSYILKW
PALNEDPITK TIAALIILWA LALTQFGGTK YTARIAKVGF FAGILLPAFI LIALAAIYLH
SGAPVAIEMD AKTFFPDFSK VGTLVVFVAF ILSYMGVEAS ATHVNEMSNP GRDYPLAMLL
LMVAAICLSS VGGLSIAMVI PGNEINLSAG VMQTFTVLMS HVAPEIEWTV RVISALLLLG
VLAEIASWIV GPSRGMYVTA QKNLLPAAFA KMNKNGVPVT LVISQLVITS IALIILTNTG
GGNNMSFLIA LALTVVIYLC AYFMLFIGYI VLVLKHPDLK RTFNIPGGKG VKLVVAIVGL
LTSIMAFIVS FLPPDNIQGD STDMYVELLV VSFLVVLALP FILYAVHDRK GKGNTGVTLE
PINSQNAPKG HFFLHPRARS PHYIVMNDKK H
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