| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1677 |
|---|
| Symbol | |
|---|
| ID | 6146441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1672795 |
|---|
| End bp | 1674480 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641616553 |
|---|
| Product | inner membrane ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_001743731 |
|---|
| Protein GI | 170682224 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAACCA TTCCCATTAC GTTTTGTATG TTGATAGCAA AGTATCTCTG TCTGCTGAAG
CCCTTTTGGC TGCGTAAGAA TAATAAAACT TCAGTGTTGT TAATCATTAT TATCCTCGCC
ATGATCCTTG GCGTGGTTAA AATTCAGGTC TGGTTAAACG ACTGGAATAA TGATTTTTTC
AATGCGCTAA GCCAGAAAGA AACTGATAAG CTTTGGCAGC TTGTCCTTTG GTTCCCTGCC
CTGCTGGGGA TCTTTGTATT AATATCCGTA AACAAAACAT GGTTAATTAA ACTACTGACT
ATTCGCTGGC GCGAATGGTT AACAGATTAC TACCTTAATC GCTGGTTTGC AGATAAAAAC
TACTACTTCA CGCAGATCTA CGGCGAGCAT AAAAATACAG ATAACCCTGA CCAACGTATC
GCTGAAGACA TTCTCTTACT GATCAGCAAA ACGCTCAGTC TTTCATTTGG CTTCATCCAG
TCACTTAGCA TGCTGATCAC CTTTACCGTT ATTCTTTGGC AAAGCGCGGG TACGCTCTCA
TTCACTGTTG GTGGAACTGA ATGGAATATC CAGGGGTATA TGGTCTATAC CGTCGTGCTC
ATTGTGATCG GTGGAACTTT ATTTACCCAT AAGGTTGGTA AACGTATTCG TCCGCTTAAT
GTGGAAAAAC AACGTAGCGA AGCGACATTT CGAACTAATC TTGTGCAGCA TAATAAGCAG
GCAGAACTGA TTGCGCTAAG CAATGCTGAG TCTCTACAAC GCCAGGAGTT GAGCGAAAAT
TTTCATACCA TTAAAGAGAA CTGGCATCGT TTAATGAATC GTCAGCGGTG GCTTGATTAC
TGGCAGAATA TTTATTCGCG CTCGCTTAGC GTTCTTCCCT ACTTTCTGTT ATTGCCGCAG
TTTATTAGCG GACAGATCAA TCTGGGCGGA CTGATGAAAT CGCGCCAGGC ATTTATGCTG
GTATCGAACA ATTTAAGCTG GTTTATTTAT AAATATGATG AACTTGCTGT ACTGGCTGCG
GTTATCGATC GCTTGTATGA GTTCCATCAA CTCACCGAAC AGCGCCCTAC GAATAAGCCT
AAAAATTGCC AACATGCGGT ACAAGTGGCT GACGCGAGTA TTCGTACTCC TGATAATAAG
ATCATATTAG AGAACCTGAA CTTTCATGTT TTGCCAGGCA AATGGCTATT GCTGAAAGGT
TACTCTGGTA CGGGAAAAAC CACACTGCTT AAAACATTAT CCCACTGCTG GCCGTGGTTT
AAAGGTGATA TTTCTTCTCC TGCTGACAGT TGGTATGTGT CACAAACACC GTTAATCAAA
ACCGGCTTAC TGAAAGAGAT TATTTGTAAA GCACTTCCCC TGTCCGTAGA CGATAAATCG
TTGAGTGAAG TACTGCATCA GGTTGGGCTG GGGAAATTGG CTACGCGTAT TCATGACCAC
GATCGCTGGG GAGATATTCT TTCCAGCGGC GAAAAACAAC GTATCGCCCT GGCTCGATTA
ATTTTACGAC GTCCGAAATG GATATTTCTT GACGAAACTA CCTCTCATCT TGAGGAACAA
GAGGCAATCC GCTTACTGCG TTTAGTGCGA GAAAAACTCC CCACAAGCGG CGTCATTATG
GTTACACATC AACCCGGTGT CTGGAACCTG GCCGATGATA TTTGTGACAT TAGCGCGGTT
TTATAA
|
|---|
| Protein sequence | MITIPITFCM LIAKYLCLLK PFWLRKNNKT SVLLIIIILA MILGVVKIQV WLNDWNNDFF
NALSQKETDK LWQLVLWFPA LLGIFVLISV NKTWLIKLLT IRWREWLTDY YLNRWFADKN
YYFTQIYGEH KNTDNPDQRI AEDILLLISK TLSLSFGFIQ SLSMLITFTV ILWQSAGTLS
FTVGGTEWNI QGYMVYTVVL IVIGGTLFTH KVGKRIRPLN VEKQRSEATF RTNLVQHNKQ
AELIALSNAE SLQRQELSEN FHTIKENWHR LMNRQRWLDY WQNIYSRSLS VLPYFLLLPQ
FISGQINLGG LMKSRQAFML VSNNLSWFIY KYDELAVLAA VIDRLYEFHQ LTEQRPTNKP
KNCQHAVQVA DASIRTPDNK IILENLNFHV LPGKWLLLKG YSGTGKTTLL KTLSHCWPWF
KGDISSPADS WYVSQTPLIK TGLLKEIICK ALPLSVDDKS LSEVLHQVGL GKLATRIHDH
DRWGDILSSG EKQRIALARL ILRRPKWIFL DETTSHLEEQ EAIRLLRLVR EKLPTSGVIM
VTHQPGVWNL ADDICDISAV L
|
|---|
| |