Gene EcSMS35_1632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1632 
Symbol 
ID6147112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand- 
Start bp1622692 
End bp1623390 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content41% 
IMG OID641616508 
ProductGntR family transcriptional regulator 
Protein accessionYP_001743686 
Protein GI170681310 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.367647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTTTTC AAAAGATTGC CCGCTTACTT AAATCCGAGA TCAATGGCTA TTCATGGCAT 
GTTGGTGATT TGTTGCCGTC AGAAGCTGAA CTCGCTGTTC GTTATAATGT TTCGCGTAAT 
ACCCTGCGTA AGGCATTATC CTTGCTGGAA GGCGAAGGAA TTATTCATAG AAAGCATGGT 
TCAGGAACAT ACATTCAAAA AAAGAATTTT GTTGCACACA TTGATCACAT GAACAGTTTC 
AGTGAAATTG CGCATAAAAG CGGCAAAGAG GCAGGGAGTC AGATTATGAA ATTTGAAGTG 
CAGGATGCTT CTCCCCCTAT TGCGACTGAG CTGAATTTAG TGACTGGTGA GCAGGTTTAT 
TACATAAAGA GACTGCGATT CATTGAGGAT AATGCAGCAC AATTAGAAGA AACGTGGATG 
TCAGTGGCAC GTTTTCCTGA TTTAACCGTA GCACATATGC AAAAATCCAA ATTTTCGTAT 
ATTGAGAACG AATGCGGGAT CAAAATCATT GGCACCTTTG AAACTTTCTC CCCGACTTTT 
CCTACCCCAG AAATCGCCAG TATTTTACGG ATCAGCCCAC GGGATCCCAT ACTTAAAATT 
CAGACCCAGG CTGTGGACAG TAACTCTATT CCGCTGGATT ATTCGTTACT TTACAGCAAT 
ATTTTCGAGT TCCAGGTAAA GTACTTTTTC CCGCGATAA
 
Protein sequence
MIFQKIARLL KSEINGYSWH VGDLLPSEAE LAVRYNVSRN TLRKALSLLE GEGIIHRKHG 
SGTYIQKKNF VAHIDHMNSF SEIAHKSGKE AGSQIMKFEV QDASPPIATE LNLVTGEQVY 
YIKRLRFIED NAAQLEETWM SVARFPDLTV AHMQKSKFSY IENECGIKII GTFETFSPTF 
PTPEIASILR ISPRDPILKI QTQAVDSNSI PLDYSLLYSN IFEFQVKYFF PR