| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1621 |
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| Symbol | ydfJ |
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| ID | 6146155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1610990 |
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| End bp | 1612357 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641616497 |
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| Product | inner membrane metabolite transport protein ydfJ |
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| Protein accession | YP_001743675 |
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| Protein GI | 170680764 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00533306 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATAG AAAAACACGA AAGAAGCACT AAGGATTTGG TGAAAGCAGC AGTATCGGGA
TGGCTGGGCA CTGCGCTTGA ATTTATGGAT TTCCAGTTAT ATTCGCTCGG CGCAGCGTTA
GTGTTTCATG AAATATTTTT TCCTGAATCA TCAACGGCAA TGGCGTTAAT TCTGGCAATG
GGAACCTACG GTGCAGGTTA TGTGGCGCGT ATTGTCGGAG CATTTATTTT CGGCAAAATG
GGCGACAGAA TCGGGCGTAA AAAAGTGCTC TTTATTACCA TAACTATGAT GGGGATCTGT
ACCACCTTAA TTGGTGTGCT GCCGACCTAT GCACAAATTG GTGTGTTTGC GCCAATTTTG
CTGGTGACGC TGCGTATTAT TCAGGGGCTG GGGGCAGGCG CGGAAATTTC CGGTGCCGGT
ACGATGCTGG CGGAATATGC GCCAAAAGGT AAGCGCGGAA TTATCTCCTC ATTTGTTGCT
ATGGGGACTA ACTGCGGAAC CTTGAGCGCA ACGGCAATCT GGGCCTTTAT GTTCTTCATT
CTCAGTAAAG AGGAACTGTT GGCGTGGGGA TGGCGTATAC CGTTCCTGGC GAGCGTTGTC
GTGATGGTCT TTGCTATCTG GTTGCGTATG AATCTGAAAG AAAGCCCGGT CTTTGAGAAG
GTTAACGACA GCAACCAACC TACAGCAAAA CCTGCACCTG CTGGTAGCAT GTTCCAGAGC
AAATCCTTCT GGCTGGCAAC AGGGCTGCGT TTTGGTCAGG CTGGTAACTC AGGTTTAATT
CAGACTTTCC TTGCAGGCTA TTTAGTGCAG ACGTTATTGT TTAACAAAGC AATTCCAACA
GATGCATTGA TGATCAGTTC GATTCTCGGC TTTATGACCA TTCCGTTCCT TGGTTGGTTA
TCCGATAAAA TTGGTCGCCG GATCCCGTAT ATTATTATGA ATACCTCTGC GATTGTGCTG
GCATGGCCAA TGCTTTCTAT CATCGTAGAT AAAAGCTATG CCCCGAGCAC CATTATGGTT
GCACTGATTG TGATTCATAA CTGTGCGGTG CTGGGATTAT TTGCTCTGGA AAACATTACC
ATGGCAGAAA TGTTCGGCTG TAAAAACCGC TTTACCCGGA TGGCCATTTC TAAAGAAATT
GGTGGTCTTA TCGCTTCCGG TTTTGGTCCT ATCCTGGCGG GTATTTTCTG CACCATGACG
GAATCCTGGT ATCCGATCGC AATTATGATC ATGGCATATT CAGTGATTGG TTTAATTTCT
GCGCTGAAAA TGCCAGAAGT GAAAGACCGT GATTTAAGTG CGCTGGAAGA CGCTGCGGAA
GATCAACCGC ATGTTGTCAG AGCTGCGCAA CCTTCCAGAA GTCTTTAA
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| Protein sequence | MTIEKHERST KDLVKAAVSG WLGTALEFMD FQLYSLGAAL VFHEIFFPES STAMALILAM
GTYGAGYVAR IVGAFIFGKM GDRIGRKKVL FITITMMGIC TTLIGVLPTY AQIGVFAPIL
LVTLRIIQGL GAGAEISGAG TMLAEYAPKG KRGIISSFVA MGTNCGTLSA TAIWAFMFFI
LSKEELLAWG WRIPFLASVV VMVFAIWLRM NLKESPVFEK VNDSNQPTAK PAPAGSMFQS
KSFWLATGLR FGQAGNSGLI QTFLAGYLVQ TLLFNKAIPT DALMISSILG FMTIPFLGWL
SDKIGRRIPY IIMNTSAIVL AWPMLSIIVD KSYAPSTIMV ALIVIHNCAV LGLFALENIT
MAEMFGCKNR FTRMAISKEI GGLIASGFGP ILAGIFCTMT ESWYPIAIMI MAYSVIGLIS
ALKMPEVKDR DLSALEDAAE DQPHVVRAAQ PSRSL
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