Gene EcSMS35_1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1608 
SymbolbioD2 
ID6143919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1596610 
End bp1597305 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content52% 
IMG OID641616484 
Productputative dithiobiotin synthetase 
Protein accessionYP_001743662 
Protein GI170684001 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0132] Dethiobiotin synthetase 
TIGRFAM ID[TIGR00347] dethiobiotin synthase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGC GTTTCTTTAT TACCGGTACA GACACTTCTG TAGGGAAAAC GGTGGTTTCC 
CGCGCATTGC TACAAGCGTT AGCCTCCCAG GGAAAAACGG TTGCGGGATA TAAACCCGTA
GCGAAGGGGA GCAAAGAGAC ACCCGAAGGG CTGCGTAATA AAGATGCCCT GGTGTTGCAG
AGTGTTTCAA CCATCGAACT GCCTTATGAA GCAGTTAATC CTATCGCGTT AAGCGAAGAA
GAAAGTAGCG TGGCGCACAG TTGCCCAATC AATTACACCC TCATTTCAAA CGGCCTGGCA
AACCTGACCG ATAAAGTCGA TCATGTCGTG GTAGAAGGGA CTGGCGGCTG GCGCAGTCTG
ATGAATGATT TGCGTCCGCT CTCTGAATGG GTGGTGCAGG AACAACTGCC GGTGTTGATG
GTTGTCGGTA TTCAGGAAGG TTGCATTAAC CATGCACTGC TAACAGCTCA GGCGATTGCC
AACGACGGGC TGCCGCTCAT TGGCTGGGTG GCTAACCGAA TCAACCCAGG ACTTGCGCAT
TATGCGGAAA TCATTGATGT GCTCGGTAAA AAACTTCCGG CACCGCTCAT TGGTGAACTG
CCTTATCTGC CGCGCGCCGA ACAGCGTGAA CTGGGGCAAT ACATCCGCTT AGCTATGCTT
CGCAGTGTGC TGGCGGTAGA TAGAGTCACG GTGTAA
 
Protein sequence
MLKRFFITGT DTSVGKTVVS RALLQALASQ GKTVAGYKPV AKGSKETPEG LRNKDALVLQ 
SVSTIELPYE AVNPIALSEE ESSVAHSCPI NYTLISNGLA NLTDKVDHVV VEGTGGWRSL
MNDLRPLSEW VVQEQLPVLM VVGIQEGCIN HALLTAQAIA NDGLPLIGWV ANRINPGLAH
YAEIIDVLGK KLPAPLIGEL PYLPRAEQRE LGQYIRLAML RSVLAVDRVT V