| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1593 |
|---|
| Symbol | |
|---|
| ID | 6147457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1580459 |
|---|
| End bp | 1580794 |
|---|
| Gene Length | 336 bp |
|---|
| Protein Length | 111 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641616469 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001743647 |
|---|
| Protein GI | 170680025 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3136] Uncharacterized membrane protein required for alginate biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0586032 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCTGG TAATCAAAGC CGCGCTCGGT GCGCTGGTAG TGCTGTTGAT TGGTGTTTTA
GCAAAAACGA AAAATTATTA TATCGCCGGG CTGATTCCAC TTTTCCCGAC CTTTGCGCTT
ATCGCGCATT ATATTGTTGC CAGCGAACGC GGCATTGAAG CCTTACGCGC AACCATCATT
TTTAGTATGT GGTCGATTAT TCCCTATTTT GTTTACCTGG CGTCGCTGTG GTATTTCACC
GGAATGATGC GCTTGCCCGC CGCTTTTGTT GGTTCTGTTG CGTGTTGGGG GATAAGCGCA
TGGGTGTTGA TTATATGCTG GATAAAGCTG CATTAA
|
|---|
| Protein sequence | MGLVIKAALG ALVVLLIGVL AKTKNYYIAG LIPLFPTFAL IAHYIVASER GIEALRATII
FSMWSIIPYF VYLASLWYFT GMMRLPAAFV GSVACWGISA WVLIICWIKL H
|
|---|
| |