| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1589 |
|---|
| Symbol | fumC |
|---|
| ID | 6146349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1575901 |
|---|
| End bp | 1577304 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641616465 |
|---|
| Product | fumarate hydratase |
|---|
| Protein accession | YP_001743643 |
|---|
| Protein GI | 170681319 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0114] Fumarase |
|---|
| TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.194502 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACAG TACGCAGCGA AAAAGATTCG ATGGGGGCGA TTGATGTCCC GGCAGATAAG
CTGTGGGGCG CACAAACTCA ACGCTCGCTG GAGCATTTCC GCATTTCGAC GGAGAAAATG
CCCACCTCAC TGATTCATGC GCTGGCACTA ACCAAGCGCG CAGCGGCAAA AGTTAATGAA
GATTTAGGCT TGTTGTCTGA AGAGAAAGCG AGCGCCATTC GTCAGGCGGC GGATGAAGTA
CTGGCAGGAC AGCATGACGA CGAATTCCCG CTGGCTATCT GGCAGACCGG CTCCGGCACG
CAAAGTAATA TGAACATGAA CGAAGTGCTG GCTAATCGGG CCAGTGAATT ACTTGGCGGC
GTGCGCGGGA TGGAGCGTAA AGTTCACCCT AACGACGACG TGAACAAAAG CCAAAGTTCC
AATGATGTCT TTCCGACGGC GATGCACGTT GCGGCGCTAC TGGCGCTGCG CAAGCAACTC
ATTCCGCAGC TTAAAACCCT GACACAGACA CTGAATGAGA AATCCCGTGC ATTTGCCGAT
ATCGTCAAAA TCGGTCGAAC CCACTTGCAG GATGCCACGC CGCTAACACT GGGGCAGGAG
ATTTCCGGCT GGGTAGCGAT GCTCGAGCAT AATCTCAAAC ATATCGAATA CAGCCTGCCG
CATGTAGCGG AACTGGCTCT TGGCGGTACA GCGGTGGGTA CTGGACTAAA TACCCATCCG
GAGTATGCGC GTCGAGTAGC AGATGAACTG GCAGTCATTA CCTGCGCTCC GTTTGTTACC
GCGCCGAACA AATTTGAAGC GCTGGCGACC TGTGATGCCC TGGTTCAGGC GCACGGCGCG
TTGAAAGGGT TGGCTGCGTC ACTGATGAAA ATTGCCAATG ATGTCCGCTG GCTGGCCTCT
GGCCCGCGCT GTGGAATTGG TGAAATCGCA ATCCCGGAAA ATGAGCCGGG CAGCTCAATC
ATGTCGGGGA AAGTGAACCC AACCCAGTGT GAGGCATTAA CCATGCTTTG CTGTCAGGTG
ATGGGGAACG ACGTGGCGAT CAACATGGGT GGCGCTTCCG GTAACTTTGA ACTGAACGTC
TTCCGTCCGA TGGTGATTCA TAATTTCCTG CAATCGGTGC GCTTGCTGGC AGATGGCATG
GAAAGTTTCA ACAAACACTG TGCAGTGGGC ATTGAACCGA ATCGTGAGCG AATCAATCAA
TTACTCAATG AATCGCTGAT GCTGGTGACT GCGCTTAACA CCCACATTGG TTATGACAAA
GCCGCCGAGA TCGCCAAAAA AGCGCATAAA GAAGGGCTGA CCTTAAAAGC TGCGGCCCTT
GCGCTGGGGT ATCTTAGCGA AGCCGAGTTT GACAGCTGGG TACGGCCAGA ACAGATGGTC
GGCAGTATGA AAGCCGGGGG TTAA
|
|---|
| Protein sequence | MNTVRSEKDS MGAIDVPADK LWGAQTQRSL EHFRISTEKM PTSLIHALAL TKRAAAKVNE
DLGLLSEEKA SAIRQAADEV LAGQHDDEFP LAIWQTGSGT QSNMNMNEVL ANRASELLGG
VRGMERKVHP NDDVNKSQSS NDVFPTAMHV AALLALRKQL IPQLKTLTQT LNEKSRAFAD
IVKIGRTHLQ DATPLTLGQE ISGWVAMLEH NLKHIEYSLP HVAELALGGT AVGTGLNTHP
EYARRVADEL AVITCAPFVT APNKFEALAT CDALVQAHGA LKGLAASLMK IANDVRWLAS
GPRCGIGEIA IPENEPGSSI MSGKVNPTQC EALTMLCCQV MGNDVAINMG GASGNFELNV
FRPMVIHNFL QSVRLLADGM ESFNKHCAVG IEPNRERINQ LLNESLMLVT ALNTHIGYDK
AAEIAKKAHK EGLTLKAAAL ALGYLSEAEF DSWVRPEQMV GSMKAGG
|
|---|
| |