| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1563 |
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| Symbol | pdxY |
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| ID | 6143214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1546970 |
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| End bp | 1547830 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641616440 |
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| Product | pyridoxamine kinase |
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| Protein accession | YP_001743618 |
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| Protein GI | 170683400 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase |
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| TIGRFAM ID | [TIGR00687] pyridoxal kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA TTCTCGCTAT CCAGTCTCAC GTTGTTTATG GTCATGCGGG TAACAGTGCG
GCAGAGTTTC CGATGCGCCG CCTGGGCGCG AACGTCTGGC CGCTGAACAC CGTTCAATTT
TCTAATCACA CCCAATACGG CAAATGGACC GGCTGCGTGA TGCCGCCCAG CCATTTAACC
GAAATAGTGC AAGGCATTGC CGCCATTGAT AAATTACACA CCTGTGATGC CGTATTAAGT
GGCTATCTGG GATCGGCGGA GCAGGGTGAA CATATCCTCG GTATCGTCCG TCAGGTGAAA
GCCGCGAATC CGCAGGCGAA ATATTTTTGC GATCCGGTAA TGGGTCATCC GGAAAAAGGC
TGTATCGTTG CACCGGGTGT CGCAGAGTTT CATGTGCGTC ACGGTTTGCC TGCCAGCGAT
ATCATTGCGC CGAATCTGGT TGAGCTGGAG ATACTCTGTG AGCATCCGGT AAATAACGTC
GAAGAAGCGG TTCTGGCAGC GCGTGAACTC ATTGCGCAAG GGCCACAAAT TGTGTTGGTT
AAACACCTGG CGCGGGCTGG CTACAGCCGT GACCGTTTTG AAATGCTGCT GGTTACCGCC
GATGAAGCCT GGCATATCAG CCGTCCGCTG GTGGATTTTG GTATGCGCCA GCCGGTAGGT
GTTGGTGATG TGACGAGCGG TTTACTGCTG GTGAAACTGC TTCAGGGGGC AACGCTGCAG
GAGGCCCTGG AACATGTGAC CGCTGCAGTA TACGAAATCA TGGTGACCAC CAAAGCAATG
CAGGAATATG AGTTGCAAGT GGTTGCTGCT CAGGATCGTA TTGCCAAACC AGAACATTAT
TTCAGCGCAA CAAAGCTCTG A
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| Protein sequence | MKNILAIQSH VVYGHAGNSA AEFPMRRLGA NVWPLNTVQF SNHTQYGKWT GCVMPPSHLT
EIVQGIAAID KLHTCDAVLS GYLGSAEQGE HILGIVRQVK AANPQAKYFC DPVMGHPEKG
CIVAPGVAEF HVRHGLPASD IIAPNLVELE ILCEHPVNNV EEAVLAAREL IAQGPQIVLV
KHLARAGYSR DRFEMLLVTA DEAWHISRPL VDFGMRQPVG VGDVTSGLLL VKLLQGATLQ
EALEHVTAAV YEIMVTTKAM QEYELQVVAA QDRIAKPEHY FSATKL
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