| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1561 |
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| Symbol | pdxH |
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| ID | 6144638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1544849 |
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| End bp | 1545505 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641616438 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_001743616 |
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| Protein GI | 170679963 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGATA ACGACGAATT GCAGCAAATC GCGCATCTGC GCCGTGAATA CACCAAAGGC
GGGTTACGCC GCCGCGATCT TCCCGCCGAT CCATTAACCC TTTTTGAACG CTGGCTCTCT
CAGGCTTGTG ACGCCAAACT GGCGGACCCT ACCGCGATGG TGGTCGCTAC CGTGGATGAA
CATGGTCAGC CTTATCAGCG CATCGTTTTA CTCAAACATT ACGACGAAAA AGGCATGGTG
TTTTACACCA ACCTCGGCAG CCGTAAAGCA CATCAAATCG AAAATAATCC GCGCGTTAGC
CTGCTGTTCC CGTGGCATAC CCTTGAGCGC CAGGTGATGG TGATCGGTAA AGCGGAACGA
CTTTCGACTC TCGAAGTGAT GAAATATTTT CATAGTCGCC CACGTGATAG CCAGATTGGT
GCATGGGTTT CGAAGCAGTC CAGTCGCATT TCTGCCCGCG GTATCCTTGA AAGTAAATTC
CTGGAGCTGA AGCAGAAGTT TCAACAGGGC GAAGTGCCAT TGCCGAGTTT TTGGGGCGGT
TTTCGCGTCA GCCTTGAACA GATTGAGTTC TGGCAGGGCG GTGAGCATCG CCTGCATGAC
CGCTTTTTGT ACCAGCGTGA AAATGATGCG TGGAAGATTG ATCGTCTTGC CCCCTGA
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| Protein sequence | MSDNDELQQI AHLRREYTKG GLRRRDLPAD PLTLFERWLS QACDAKLADP TAMVVATVDE
HGQPYQRIVL LKHYDEKGMV FYTNLGSRKA HQIENNPRVS LLFPWHTLER QVMVIGKAER
LSTLEVMKYF HSRPRDSQIG AWVSKQSSRI SARGILESKF LELKQKFQQG EVPLPSFWGG
FRVSLEQIEF WQGGEHRLHD RFLYQRENDA WKIDRLAP
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