| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1546 |
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| Symbol | rnt |
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| ID | 6143918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1533862 |
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| End bp | 1534509 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641616423 |
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| Product | ribonuclease T |
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| Protein accession | YP_001743601 |
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| Protein GI | 170681755 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.49714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.657229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATA ACGCTCAACT TACCGGTCTG TGCGACCGTT TTCGTGGTTT TTATCCTGTT
GTGATCGATG TTGAAACAGC CGGATTTAAT GCCAAAACCG ATGCGCTGCT TGAGATTGCC
GCCATCACCC TGAAAATGGA TGAACAAGGC TGGCTGATGC CGGACACCAC ATTACATTTC
CACGTCGAAC CATTTGTCGG CGCAAATTTG CAGCCAGAGG CCCTCGCCTT CAACGGTATT
GACCCGAACG ATCCCGATCG CGGCGCGGTC AGCGAATACG AGGCGCTGCA CGAAATTTTT
AAAGTTGTAC GTAAAGGCAT TAAAGCGAGC GGCTGTAACC GCGCCATTAT GGTGGCGCAC
AACGCCAATT TCGATCACAG CTTTATGATG GCCGCCGCAG AACGCGCCTC ACTGAAACGT
AACCCGTTCC ACCCTTTCGC CACTTTTGAC ACTGCTGCAC TGGCCGGGCT GGCACTCGGA
CAAACCGTAT TGTCAAAGGC TTGCCAGACC GCTGGCATGG ACTTCGACAG CACCCAGGCG
CACTCCGCGC TGTACGACAC CGAACGCACT GCTGTGCTGT TTTGTGAAAT CGTCAACCGC
TGGAAACGTC TGGGAGGCTG GCCGCTACCT GCCGCCGAAG AGGTGTAA
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| Protein sequence | MSDNAQLTGL CDRFRGFYPV VIDVETAGFN AKTDALLEIA AITLKMDEQG WLMPDTTLHF
HVEPFVGANL QPEALAFNGI DPNDPDRGAV SEYEALHEIF KVVRKGIKAS GCNRAIMVAH
NANFDHSFMM AAAERASLKR NPFHPFATFD TAALAGLALG QTVLSKACQT AGMDFDSTQA
HSALYDTERT AVLFCEIVNR WKRLGGWPLP AAEEV
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