Gene EcSMS35_1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1544 
Symbol 
ID6147407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1528755 
End bp1529102 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content52% 
IMG OID641616421 
Producthypothetical protein 
Protein accessionYP_001743599 
Protein GI170680379 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0278] Glutaredoxin-related protein 
TIGRFAM ID[TIGR00365] monothiol glutaredoxin, Grx4 family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.310031 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA CTATCGAAAA AATCCAACGC CAGATTGCTG AAAACCCGAT CCTGCTGTAC 
ATGAAAGGTT CACCGAAACT GCCGAGCTGC GGTTTCTCTG CCCAGGCAGT CCAGGCGCTT
GCCGCATGTG GCGAACGTTT TGCCTATGTT GATATCCTGC AGAATCCGGA CATTCGTGCG
GAACTGCCGA AATATGCTAA CTGGCCGACC TTCCCGCAAC TGTGGGTTGA CGGCGAGCTG
GTCGGCGGTT GTGATATCGT GATCGAAATG TATCAGCGTG GCGAACTGCA GCAGTTGATC
AAAGAAACTG CCGCTAAATA CAAGTCTGAA GAGCCGGACG CTGAATAA
 
Protein sequence
MSTTIEKIQR QIAENPILLY MKGSPKLPSC GFSAQAVQAL AACGERFAYV DILQNPDIRA 
ELPKYANWPT FPQLWVDGEL VGGCDIVIEM YQRGELQQLI KETAAKYKSE EPDAE