| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1541 |
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| Symbol | |
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| ID | 6146502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1525569 |
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| End bp | 1526738 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641616418 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001743596 |
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| Protein GI | 170684306 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.188499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.114044 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTA ACTATCCGTT GCTGGCGCTG GCGATTGGCG CGTTTGGTAT CGGGACAACG
GAGTTCTCGC CAATGGGCTT ATTGCCCGTC ATTGCGCGCG GTGTGGATGT CTCGATTCCC
GCTGCCGGAA TGTTAATCAG TGCCTATGCA GTTGGCGTAA TGGTTGGCGC GCCGCTGATG
ACGCTTCTAC TTTCTCATCG TGCTCGCCGC AGTGCGTTGA TTTTCCTGAT GGCGATTTTC
ACGCTCGGCA ACGTACTTTC CGCCATCGCG CCGGATTATA TGACTCTGAT GCTTTCACGC
ATTTTGACCA GCCTGAATCA CGGAGCATTT TTTGGTTTGG GTTCAGTTGT GGCCGCAAGC
GTGGTGCCAA AACATAAACA GGCCAGCGCA GTTGCCACTA TGTTTATGGG GTTAACCCTG
GCAAATATCG GTGGCGTGCC GGCGGCGACC TGGTTGGGTG AAACCATCGG CTGGCGGATG
TCATTTCTGG CAACGGCGGG GCTGGGAGTG ATTTCAATGG TAAGTCTGTT CTTCTCATTA
CCTAAAGGTG GCGCAGGGGC GCGACCTGAA GTGAAAAAAG AGCTGGCGGT ATTAATGCGT
CCGCAGGTGC TGTCTGCATT GCTGACGACG GTACTGGGAG CTGGTGCAAT GTTTACCCTC
TACACCTATA TCTCTCCGGT ACTGCAAAGT ATTACCCACG CAACACCGGT GTTCGTTACG
GCAATGCTGG TGCTGATTGG TGTCGGATTC TCTATCGGTA ACTATCTCGG CGGCAAACTG
GCAGATCGTT CAGTTAACGG CACGTTGAAA GGCTTTTTGT TGCTGCTGAT GGTGATTATG
CTGGCAATCC CGTTCCTGGC CCGCAATGAG TTCGGCGCAG CTATTAGCAT GGTGGTGTGG
GGCGCTGCAA CCTTTGCGGT CGTACCGCCG TTACAGATGC GCGTGATGCG TGTCGCCAGT
GAAGCGCCAG GTCTGTCTTC ATCAGTCAAT ATTGGTGCCT TTAATCTTGG AAATGCGCTG
GGAGCAGCTG CTGGTGGTGC GGTAATTTCC GCTGGGCTGG GATACAGTTT TGTGCCGGTG
ATGGGGGCGA TTGTCGCGGG ACTGGCATTA TTACTGGTGT TTATGTCAGC CAGAAAACAA
CCTGAAACAG TTTGCGTTGC CAACAGCTAA
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| Protein sequence | MKINYPLLAL AIGAFGIGTT EFSPMGLLPV IARGVDVSIP AAGMLISAYA VGVMVGAPLM
TLLLSHRARR SALIFLMAIF TLGNVLSAIA PDYMTLMLSR ILTSLNHGAF FGLGSVVAAS
VVPKHKQASA VATMFMGLTL ANIGGVPAAT WLGETIGWRM SFLATAGLGV ISMVSLFFSL
PKGGAGARPE VKKELAVLMR PQVLSALLTT VLGAGAMFTL YTYISPVLQS ITHATPVFVT
AMLVLIGVGF SIGNYLGGKL ADRSVNGTLK GFLLLLMVIM LAIPFLARNE FGAAISMVVW
GAATFAVVPP LQMRVMRVAS EAPGLSSSVN IGAFNLGNAL GAAAGGAVIS AGLGYSFVPV
MGAIVAGLAL LLVFMSARKQ PETVCVANS
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