| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1533 |
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| Symbol | |
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| ID | 6143700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1516732 |
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| End bp | 1517988 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641616410 |
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| Product | hypothetical protein |
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| Protein accession | YP_001743588 |
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| Protein GI | 170682120 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000116235 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.00188577 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGATCTG ATGCGAAAAA CTTGATGAGC GACGGGAACG TGCAAATTGT TAAGACCGGC
GAGGTCATTG GCGCGACGCA ACTTACTGAA GGCGAGTTAA TTGTTGAGGC TGGCGGAAGA
GCCGAAAATA CCGTGGTCAC GGGGGCTGGC TGGTTGAAAG TGGCAACCGG TGGGATCGCC
AAATGCACAC AGTACGGCAA CAATGGCACG CTATCGGTCA GCGACGGTGC CATTGCCACA
GATATTGTTC AGTCCGAGGG AGGCGCAATT AGTCTCTCTA CGCTCGCTAC GGTTAATGGC
CGCCATCCCG AAGGTGAATT CAGCGTTGAT AAAGGTTATG CCTGCGGTTT GTTGCTGGAA
AATGGCGGTA ACCTGCGTGT ACTGGAAGGC CATCGCGCGG AAAAAATTAT TCTCGATCAA
GAGGGTGGCC TGTTGGTCAA TGGGACAACC TCAGCGGTCG TGGTAGATGA AGGTGGTGAA
TTGTTGGTGT ATCCAGGTGG GGAAGCCAGC AATTGTGAGA TTAATCAGGG CGGCGTTTTT
ATGCTGGCGG GGAAAGCCAA TGATACGTTG CTTGCTGGTG GCACCATGAA TAATCTCGGT
GGTGAAGACT CTGACACTAT TGTTGAGAAT GGAGCCATCT ATCGTCTGGG GACGGATGGT
CTTCAGCTCT ACAGTTCCGG TAAGACGCAA AACCTGTCCG TTAATGTGGG TGGTCGGGCT
GAAGTGCATG CCGGTACGCT GGAAAATGCG GTAATACAAG GTGGGACAGT GATCCTGTTG
TCACCCACCA GCGCGGACGA AAATTTTGTC GTAGAGGAAG ATCGCGCACC GGTTGAACTG
ACCGGTAGTG TTGCATTACT GGACGGCGCT TCAATGATTA TTGGCTATGG CGCAGATCTG
CAACAATCAA CGATTACTGT ACAGCAGGGC GGTGTATTGA TTCTCGACGG CAGTACGATA
AAAGGTGACA GTGTCACTTT CAGTGTTGGT AACATCAATC TCAATGGCGG AAAACTGTGG
CTAATCACTG GTGCGGCAAC GCATGTGCAA CTTAAAGTGA AACGCCTGCG CGGAGAGGGA
GCGATTTGCC TGCAAACCAG TGCGAAAGAA ATTTCACCTG ACTTCATCAA TGTGAAAGGG
GAAGTTACTG GTGATATACA CGTTGAGATA ACAGATGCCA GTCGGCAAAC TCTGTGTAAC
GCACTGAAAC TACAGCCAGA CGAAGACGGG ATTGGCGCAA CGCTCCAGCC TGCGTAA
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| Protein sequence | MGSDAKNLMS DGNVQIVKTG EVIGATQLTE GELIVEAGGR AENTVVTGAG WLKVATGGIA
KCTQYGNNGT LSVSDGAIAT DIVQSEGGAI SLSTLATVNG RHPEGEFSVD KGYACGLLLE
NGGNLRVLEG HRAEKIILDQ EGGLLVNGTT SAVVVDEGGE LLVYPGGEAS NCEINQGGVF
MLAGKANDTL LAGGTMNNLG GEDSDTIVEN GAIYRLGTDG LQLYSSGKTQ NLSVNVGGRA
EVHAGTLENA VIQGGTVILL SPTSADENFV VEEDRAPVEL TGSVALLDGA SMIIGYGADL
QQSTITVQQG GVLILDGSTI KGDSVTFSVG NINLNGGKLW LITGAATHVQ LKVKRLRGEG
AICLQTSAKE ISPDFINVKG EVTGDIHVEI TDASRQTLCN ALKLQPDEDG IGATLQPA
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