Gene EcSMS35_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1519 
Symbollpp 
ID6146336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1505207 
End bp1505443 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content51% 
IMG OID641616397 
Productmajor outer membrane lipoprotein 
Protein accessionYP_001743577 
Protein GI170682645 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4238] Murein lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.33689e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value9.78616e-10 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAAGCTA CTAAACTGGT ACTGGGCGCG GTAATCCTGG GTTCTACTCT GCTGGCAGGT 
TGCTCCAGCA ACGCTAAAAT CGATCAGCTG TCTTCTGACG TTCAGACTCT GAACGCTAAA
GTTGACCAGC TGAGCAACGA CGTGAACGCA ATGCGTTCCG ACGTTCAGGC TGCTAAAGAT
GACGCAGCTC GTGCTAACCA GCGTCTGGAC AACATGGCTA CTAAATACCG CAAGTAA
 
Protein sequence
MKATKLVLGA VILGSTLLAG CSSNAKIDQL SSDVQTLNAK VDQLSNDVNA MRSDVQAAKD 
DAARANQRLD NMATKYRK