Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1498 |
Symbol | |
ID | 6147100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 1482479 |
End bp | 1483243 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641616376 |
Product | putative electron transfer flavoprotein YdiQ |
Protein accession | YP_001743556 |
Protein GI | 170682544 |
COG category | [C] Energy production and conversion |
COG ID | [COG2086] Electron transfer flavoprotein, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.143654 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAA TAACCTGCTT TAAGCTGGTG CCTGAAGAAC AGGACATTGT TGTCACTCCA GAATATACCC TGAATTTCGA CAATGCCGAC GCCAAAATCA GCCAGTTCGA TCTCAATGCC ATTGAAGCTG CAAGCCAGCT TGCATCAGAT GACGATGAGA TAGCCGCGCT GACCATTGGC GGCTCATTGT TGCAGAACTC GAAAGTGCGA AAAGACGTGC TATCCCGCGG GCCGCATAGC CTGTATTTGG TGCAGGATGC GCAACTTGAA CATGCACTGC CTCTCGATAC CGCAAAGGCG CTGGCGGCAG CAGTTGAAAA GATCGGCTTC GATTTACTGA TCTTTGGTGA AGGTTCCGGC GACCTTTATG CCCAGCAGGT TGGCTTGCTG GTCGGAGAAA TTCTGCAACT TCCGGTGATT AATGCAGTGA GTGCTATTCA GCGTCAGGGC AATACACTGG TGATTGAACG CACGCTTGAA GATGATGTTG AAGTTATTGA GCTCTCTGTT CCAGCCGTGC TCTGCGTCAC CTCCGATATT AACATGCCAC GCATTCCTTC GATGAAAGCC ATTCTCGGCG CGGGTAAAAA ACCGGTAAAT CAGTGGCAGG CAAGTGACAT TGGCTGGAGC CAGAGCGCAC CACTTGCTGA ACTGACCGGT ATTCGCGTAC CGCCGCAAAC AGAACGTAAG CACATCATTC TCGATAACGA TTCGCCGGAG GCCATTGCCG AGCTGGCGGA ACATCTGAAG AAAGCCCTGA ACTGA
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Protein sequence | MKIITCFKLV PEEQDIVVTP EYTLNFDNAD AKISQFDLNA IEAASQLASD DDEIAALTIG GSLLQNSKVR KDVLSRGPHS LYLVQDAQLE HALPLDTAKA LAAAVEKIGF DLLIFGEGSG DLYAQQVGLL VGEILQLPVI NAVSAIQRQG NTLVIERTLE DDVEVIELSV PAVLCVTSDI NMPRIPSMKA ILGAGKKPVN QWQASDIGWS QSAPLAELTG IRVPPQTERK HIILDNDSPE AIAELAEHLK KALN
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