| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1475 |
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| Symbol | rplT |
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| ID | 6143189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1459140 |
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| End bp | 1459496 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641616353 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_001743533 |
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| Protein GI | 170681717 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00112766 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.994908 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCGCG TAAAACGTGG TGTTATTGCA CGCGCACGTC ACAAGAAAAT TTTGAAACAA
GCTAAAGGCT ACTACGGTGC GCGTTCTCGC GTATACCGCG TTGCCTTCCA GGCTGTTATC
AAAGCTGGTC AGTATGCTTA CCGTGACCGT CGTCAACGTA AGCGTCAGTT CCGTCAACTG
TGGATTGCGC GTATCAACGC AGCAGCACGT CAGAACGGTA TTTCTTACAG CAAATTCATC
AATGGCCTGA AAAAAGCCTC TGTTGAAATC GACCGTAAGA TCCTGGCTGA TATCGCAGTA
TTCGACAAAG TAGCGTTCAC CGCTCTGGTT GAAAAAGCGA AAGCAGCTCT GGCATAA
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| Protein sequence | MARVKRGVIA RARHKKILKQ AKGYYGARSR VYRVAFQAVI KAGQYAYRDR RQRKRQFRQL
WIARINAAAR QNGISYSKFI NGLKKASVEI DRKILADIAV FDKVAFTALV EKAKAALA
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