| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1457 |
|---|
| Symbol | chbF |
|---|
| ID | 6146904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1440598 |
|---|
| End bp | 1441950 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641616335 |
|---|
| Product | 6-phospho-beta-glucosidase |
|---|
| Protein accession | YP_001743515 |
|---|
| Protein GI | 170680403 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.307049 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGA AATTAAAAGT CGTCACTATT GGTGGCGGGA GCAGCTATAC CCCGGAGTTA
CTGGAAGGAT TTATTAAGCG TTATCACGAA TTGCCGGTCA GCGAATTATG GCTGGTGGAT
GTCGAAGATG GTAAAGAGAA ACTGGATATT ATTTTTGATC TCTGCCAACG GATGATTGAT
AACGCTGGCG TCCCGATGAA GCTTTATAAA ACGCTGGATC GCCGCGAAGC ATTGAAAGAT
GCTGATTTCG TTACTACCCA ACTGCGCGTA GGCCAATTAC CGGCGCGCGA ACTGGATGAA
CGTATTCCAT TAAGTCATGG TTATCTTGGT CAGGAAACCA ACGGCGCGGG CGGCCTGTTT
AAAGGTCTGC GTACCATTCC GGTGATTTTT GACATCGTAA AAGATGTCGA AGAACTTTGT
CCGAATGCAT GGGTGATTAA TTTCACTAAC CCGGCGGGAA TGGTCACTGA AGCCGTTTAT
CGTCATACTG GATTTAAACG CTTTATCGGC GTGTGTAATA TTCCGATCGG CATGAAGATG
TTTATTCGCG ATGTTCTGAT GCTGAAAGAC AGCGATGATT TATCTATCGA TCTGTTCGGC
CTCAACCATA TGGTGTTCAT TAAAGATGTG CTGGTAAATG GCAAATCACG CTTTGCCGAA
TTGCTTGATG GTGTGGCATC CGGGCAGTTA AAAGCATCTG GCGTTAAAAA TATTTTCGAT
CTGCCATTTA GCGAAGGCTT AATTCGTTCT CTGAATCTGT TGCCGTGTTC TTATTTGCTT
TATTACTTCA AGCAAAAAGA GATGCTGGCT ATTGAAATGG GCGAATACTA CAAAGGCGGC
GCACGAGCGC AGGTAGTACA GAAAGTCGAG AAACAACTTT TTGAGCTGTA TAAAAACCCG
GAGTTGAAAG TTAAGCCGAA AGAACTGGAA CAGCGCGGTG GGGCTTATTA CTCTGATGCT
GCATGCGAAG TGATCAACGC TATCTACAAC GACAAGCAAG CTGAACATTA CGTTAATATC
CCGCATCATG GGCATATTGA TAATATTCCG GCAGACTGGG CGGTAGAAAT GACCTGTACG
CTGGGGCGCG ATGGCGCGAC GCCACATCCG CGCATTACGC ATTTCGATGA TAAAGTGATG
GGGCTGATTC ACACCATTAA AAGCTTCGAG ATTGCTGCCA GCAACGCCGC ACTTAGCGGA
GAGTTTAACG ATGTGTTACT GGCCCTAAAC CTTAGTCCGT TGGTGCATTC CGATCGCGAT
GCTGAGCTGC TGGCACGCGA GATGATTCTG GCGCACGAGA AATGGTTGCC AAATTTTGCC
GACTGCATCG CAGAGCTTAA AAAAGCACAT TAA
|
|---|
| Protein sequence | MSQKLKVVTI GGGSSYTPEL LEGFIKRYHE LPVSELWLVD VEDGKEKLDI IFDLCQRMID
NAGVPMKLYK TLDRREALKD ADFVTTQLRV GQLPARELDE RIPLSHGYLG QETNGAGGLF
KGLRTIPVIF DIVKDVEELC PNAWVINFTN PAGMVTEAVY RHTGFKRFIG VCNIPIGMKM
FIRDVLMLKD SDDLSIDLFG LNHMVFIKDV LVNGKSRFAE LLDGVASGQL KASGVKNIFD
LPFSEGLIRS LNLLPCSYLL YYFKQKEMLA IEMGEYYKGG ARAQVVQKVE KQLFELYKNP
ELKVKPKELE QRGGAYYSDA ACEVINAIYN DKQAEHYVNI PHHGHIDNIP ADWAVEMTCT
LGRDGATPHP RITHFDDKVM GLIHTIKSFE IAASNAALSG EFNDVLLALN LSPLVHSDRD
AELLAREMIL AHEKWLPNFA DCIAELKKAH
|
|---|
| |