Gene EcSMS35_1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1438 
Symbol 
ID6146510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1423584 
End bp1424291 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content51% 
IMG OID641616316 
Producthypothetical protein 
Protein accessionYP_001743496 
Protein GI170682770 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.319111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGA TGCAATCGCG AAAAATCTGG TACTACCGTA TAACCCTCAT CATCCTGTTG 
TTCGCTATGC TGCTGGCATG GGCGCTGCTT CCCGGCGTCC ATGAGTTTAT CAATCGCAGC
GTTGCGGCGT TTGCCGCCGT GGACCAACAG GGTATAGAAC GCTTTATTCA GTCTTACGGC
GCACTAGCGG CAGTTGTCTC GTTCTTGTTG ATGATTTTAC AGGCCATTGC TGCACCGCTA
CCTGCGTTTT TGATCACCTT TGCCAATGCG TCGCTGTTTG GCGCGTTCTG GGGCGGCTTA
CTGTCGTGGA CCAGTTCGAT GGCCGGCGCG GCGCTGTGCT TTTTTATCGC CAGAGTGATG
GGCCGCGAAG TGGTGGAAAA ATTAACCGGC AAAACCGTAC TTGACAGTAT GGACGGCTTT
TTCACTCGCT ACGGCAAACA CACCATCCTG GTATGTCGGT TATTGCCTTT TGTCCCTTTC
GATCCAATCA GCTATGCTGC CGGTTTGACT TCAATACGTT TTCGCTCGTT TTTTATCGCC
ACCGGGCTTG GTCAGTTACC GGCAACTATT GTTTATTCCT GGGCGGGCAG CATGTTAACA
GGCGGTACTT TCTGGTTTGT CACCGGACTG TTTATTCTGT TTGCCCTGAC CGTGGTGATT
TTTATGGCGA AGAAAATATG GCTTGAGCGC CAGAAGAGGA ATGCCTGA
 
Protein sequence
MMKMQSRKIW YYRITLIILL FAMLLAWALL PGVHEFINRS VAAFAAVDQQ GIERFIQSYG 
ALAAVVSFLL MILQAIAAPL PAFLITFANA SLFGAFWGGL LSWTSSMAGA ALCFFIARVM
GREVVEKLTG KTVLDSMDGF FTRYGKHTIL VCRLLPFVPF DPISYAAGLT SIRFRSFFIA
TGLGQLPATI VYSWAGSMLT GGTFWFVTGL FILFALTVVI FMAKKIWLER QKRNA