Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1427 |
Symbol | selD |
ID | 6146419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1412305 |
End bp | 1413348 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641616305 |
Product | selenophosphate synthetase |
Protein accession | YP_001743485 |
Protein GI | 170681972 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0709] Selenophosphate synthase |
TIGRFAM ID | [TIGR00476] selenium donor protein |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000127521 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.773319 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGA ACTCGATTCG TTTGACCCAA TACAGCCACG GCGCTGGTTG CGGCTGTAAA ATTTCCCCAA AAGTGTTGGA AACCATCCTG CACAGTGAGC AGGCGAAGTT TGTTGATCCG AATTTGCTTG TGGGTAATGA AACCCGCGAC GATGCGGCGG TGTACGATCT GGGCAATGGC ACCAGCGTTA TCAGTACCAC CGACTTCTTT ATGCCGATCG TTGATAATCC TTTCGATTTT GGCCGCATTG CGGCGACTAA CGCCATCAGC GATATCTTCG CAATGGGCGG CAAACCGATT ATGGCGATTG CGATCCTCGG CTGGCCGATT AACAAACTTT CCCCGGAAAT TGCCCGCGAA GTGACCGAAG GTGGACGCTA TGCATGCCGT CAGGCGGGTA TTGCGCTGGC TGGCGGTCAC TCCATCGATG CGCCGGAGCC GATTTTTGGT CTGGCGGTAA CGGGGATCGT ACCGACCGAG CGGGTGAAGA AAAACAGTAC CGCACAAGCC GGATGCAAAC TGTTCCTGAC GAAACCGCTG GGGATTGGCG TTCTTACCAC GGCTGAGAAA AAATCACTGC TTAAACCAGA ACATCAGGGA TTGGCGACGG AAGTGATGTG CCGGATGAAC ATCGCAGGCG CGTCCTTTGC CAACATCGAA GGCGTAAAAG CGATGACAGA CGTTACGGGT TTTGGTTTGC TGGGGCATTT AAGCGAAATG TGTCAGGGCG CAGGTGTGCA GGCGCGCGTC GACTATGACG CGATCCCGAA ATTGCCTGGG GTTGAAGAGT ACATTAAGTT GGGCGCAGTG CCTGGCGGCA CCGAACGTAA CTTTGCCAGC TACGGTCATC TGATGGGTGA AATGCCGCGT GAAGTGCGCG ATCTGCTGTG CGATCCGCAA ACTTCTGGCG GTTTGCTGCT GGCGGTCATT CCGGAAGCAG AAAATGAGGT CAAAGCTACA GCCGCCGAGT TTGGCATTGA ACTGACGGCG ATTGGCGAAC TGGTGCCAGC GCGCGGCGGT CGTGCCATGG TTGAGATCCG TTAA
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Protein sequence | MSENSIRLTQ YSHGAGCGCK ISPKVLETIL HSEQAKFVDP NLLVGNETRD DAAVYDLGNG TSVISTTDFF MPIVDNPFDF GRIAATNAIS DIFAMGGKPI MAIAILGWPI NKLSPEIARE VTEGGRYACR QAGIALAGGH SIDAPEPIFG LAVTGIVPTE RVKKNSTAQA GCKLFLTKPL GIGVLTTAEK KSLLKPEHQG LATEVMCRMN IAGASFANIE GVKAMTDVTG FGLLGHLSEM CQGAGVQARV DYDAIPKLPG VEEYIKLGAV PGGTERNFAS YGHLMGEMPR EVRDLLCDPQ TSGGLLLAVI PEAENEVKAT AAEFGIELTA IGELVPARGG RAMVEIR
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