Gene EcSMS35_1426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1426 
Symbol 
ID6142756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1411637 
End bp1412188 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content56% 
IMG OID641616304 
Producthypothetical protein 
Protein accessionYP_001743484 
Protein GI170682220 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00297236 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.808801 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCAC TCGAACTATT GATCAATCGC CGTAGCGCCT CCCGCCTGGC TGAACCCGCG 
CCAACGGGTG AACAACTGCA AAACATCCTG CGTGCGGGTA TGCGTGCGCC GGACCATAAG
TCCATGCAAC CGTGGCATTT CTTTGTGATT GAAGGGGAAG GGCGCGAGCG TTTCAGCGCC
GTACTGGAGC AGGGGGCGAT TGCTGCCGGT AGTGATAACA AAGCCATCGA CAAAGCGCGT
AATGCGCCGT TCCGCGCACC GCTCATCATA ACGGTGGTGG CAAAATGCGA AGAGAATCAT
AAAGTCCCGC GCTGGGAACA GGAAATGTCT GCGGGATGCG CGGTCATGGC GATGCAAATG
GCAGCAGTTG CCCAGGGGTT TGGCGGCATC TGGCGCAGTG GTGCATTAAC TGAAAGTCCG
GTAGTGCGTG AAGCATTCGG TTGCCGTGAG CAGGATAAAA TTGTCGGTTT TCTCTACCTC
GGTACGCCGC AGTTGAAAGC ATCTACGTCG ATAAACGTCC CGGACCCGAC GCCGTTTGTG
ACTTATTTCT GA
 
Protein sequence
MDALELLINR RSASRLAEPA PTGEQLQNIL RAGMRAPDHK SMQPWHFFVI EGEGRERFSA 
VLEQGAIAAG SDNKAIDKAR NAPFRAPLII TVVAKCEENH KVPRWEQEMS AGCAVMAMQM
AAVAQGFGGI WRSGALTESP VVREAFGCRE QDKIVGFLYL GTPQLKASTS INVPDPTPFV
TYF