Gene EcSMS35_1413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1413 
SymbolmsrB 
ID6143783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1397884 
End bp1398297 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content49% 
IMG OID641616291 
Productmethionine sulfoxide reductase B 
Protein accessionYP_001743471 
Protein GI170680440 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.133391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAATA AACCTTCGGC AGAAGAACTG AAAAAAAATT TGTCCGAGAT GCAGTTCTAC 
GTGACGCAGA ATCATGGGAC AGAGCCGCCA TTTACGGGTC GTTTACTGCA TAACAAGCGT
GACGGCGTAT ATCACTGTTT GATCTGCGAT GCCCCGCTGT TTCATTCCCA AACCAAGTAT
GATTCCGGCT GTGGCTGGCC CAGTTTCTAC GAACCGGTGA GTGAAGAATC CATTCGTTAT
ATCAAAGACT TGTCACATGG AATGCAGCGC ATAGAAATTC GTTGCGGTAA CTGTGATGCC
CATCTGGGGC ATGTCTTCCC CGACGGGCCG CAGCCAACGG GCGAACGTTA TTGTGTTAAC
TCTGCCTCTT TACGCTTTAC CGATGGCGAA AACGGCGAAG AAATCAACGG TTGA
 
Protein sequence
MANKPSAEEL KKNLSEMQFY VTQNHGTEPP FTGRLLHNKR DGVYHCLICD APLFHSQTKY 
DSGCGWPSFY EPVSEESIRY IKDLSHGMQR IEIRCGNCDA HLGHVFPDGP QPTGERYCVN
SASLRFTDGE NGEEING