Gene EcSMS35_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1409 
SymbolmipA 
ID6143612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1393838 
End bp1394584 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content52% 
IMG OID641616287 
ProductMltA-interacting protein MipA 
Protein accessionYP_001743467 
Protein GI170682310 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3713] Outer membrane protein V 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.543769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAAAC TCAAACTTCT GGCACTTGGA GTGCTTATCG CAACGTCTGC AGGCGTAGCG 
CACGCTGAAG GTAAATTTTC CCTGGGCGCA GGCGTAGGTG TCGTTGAACA CCCATATAAA
GATTACGATA CCGATGTTTA CCCAGTACCG GTAATCAACT ATGAAGGCGA TAACTTCTGG
TTCCGTGGCT TAGGTGGTGG TTACTACCTG TGGAATGACG CAACGGACAA ACTTTCAATT
ACCGCTTACT GGTCGCCGCT TTACTTCAAA GCTAAAGACA GTGGCGATCA CCAAATGCGT
CACCTGGATG ACCGTAAGAG CACCATGATG GCTGGTCTGT CTTATGCTCA CTTTACCCAG
TACGGTTACC TGCGTACCAC CCTGGCTGGC GATACCCTGG ATAACAGCAA CGGCATTGTC
TGGGATATGG CCTGGTTGTA TCGTTACACC AACGGCGGCC TGACCGTGAC TCCGGGTATT
GGTGTGCAGT GGAACAGCGA AAACCAGAAC GAATACTATT ATGGCGTATC GCGCAAAGAG
TCCGCTCGCA GCGGTCTGCG TGGCTATAAC CCGAACGACA GCTGGAGCCC TTACCTGGAG
CTGAGCGCCA GCTACAACTT CCTCGGCGAC TGGAGTGTTT ACGGTACCGC GCGCTACACC
CGTCTGTCTG ATGAAGTTAC TGACAGCCCA ATGGTGGATA AATCCTGGAC TGGCCTGATT
TCTACCGGGA TCACCTACAA ATTCTGA
 
Protein sequence
MTKLKLLALG VLIATSAGVA HAEGKFSLGA GVGVVEHPYK DYDTDVYPVP VINYEGDNFW 
FRGLGGGYYL WNDATDKLSI TAYWSPLYFK AKDSGDHQMR HLDDRKSTMM AGLSYAHFTQ
YGYLRTTLAG DTLDNSNGIV WDMAWLYRYT NGGLTVTPGI GVQWNSENQN EYYYGVSRKE
SARSGLRGYN PNDSWSPYLE LSASYNFLGD WSVYGTARYT RLSDEVTDSP MVDKSWTGLI
STGITYKF