Gene EcSMS35_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1390 
Symbol 
ID6145777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1379551 
End bp1380189 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content45% 
IMG OID641616268 
Productleucine export protein LeuE 
Protein accessionYP_001743448 
Protein GI170680974 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.547214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGCTG AATACGGGGT TCTGAATTAC TGGACCTATC TGGTTGGGGC CATTTTTATT 
GTGTTGGTGC CAGGGCCAAA TACCCTGTTT GTACTCAAAA ATAGCGTCAG TAGCGGTATG
AAAGGCGGTT ATCTTGCGGC CTGTGGTGTA TTTATTGGCG ATGCGGTATT GATGTTTCTG
GCATGGGCTG GAGTGGCGAC ATTAATTAAG ACCACCCCGA TATTATTCAA CATTGTACGT
TATCTTGGTG CGTTTTATTT GCTCTATCTG GGGAGTAAAA TTCTCTACGC GACCCTGAAG
GGTAAAAATA ACGAGGCCAA ATCCGATGAG CCTCAATACG GTGCCATTTT TAAACGCGCG
TTAATTTTGA GCCTGACTAA TCCGAAAGCC ATTTTGTTCT ATGTGTCGTT TTTCGTACAG
TTTATCGATG TTAATGCCCC ACATACGGGA ATTTCATTCT TTATTCTGGC GACGACGCTG
GAACTGGTGA GTTTCTGCTA TTTGAGCTTC CTGATTATTT CTGGTGCTTT TGTCACACAG
TACATACGTA CCAAAAAGAA ACTGGCTAAA GTGGGCAACT CACTGATTGG TTTGATGTTC
GTGGGTTTCG CCGCCCGACT GGCGACGCTG CAATCCTGA
 
Protein sequence
MFAEYGVLNY WTYLVGAIFI VLVPGPNTLF VLKNSVSSGM KGGYLAACGV FIGDAVLMFL 
AWAGVATLIK TTPILFNIVR YLGAFYLLYL GSKILYATLK GKNNEAKSDE PQYGAIFKRA
LILSLTNPKA ILFYVSFFVQ FIDVNAPHTG ISFFILATTL ELVSFCYLSF LIISGAFVTQ
YIRTKKKLAK VGNSLIGLMF VGFAARLATL QS