| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1289 |
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| Symbol | otsA |
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| ID | 6143857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1277904 |
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| End bp | 1279328 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641616167 |
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| Product | trehalose-6-phosphate synthase |
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| Protein accession | YP_001743347 |
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| Protein GI | 170683748 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00398964 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000000119842 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCGTT TAGTCGTAGT ATCTAACCGG ATTGCACCAC CAGACGAGCA CGCCGCCAGT
GCCGGTGGCC TTGCCGTTGG CATACTGGGG GCACTGAAAG CCGCAGGCGG ACTGTGGTTT
GGCTGGAGTG GTGAAACAGG GAATGAGGAT CAGCCGCTAA AAAAGGTGAA AAAAGGTAAC
ATTACGTGGG CCTCTTTTAA CCTCAGCGAA CAGGACCTTG ACGAATACTA CAACCAATTC
TCCAATGCCG TTCTCTGGCC CGCTTTTCAT TATCGGCTCG ATCTGGTGCA ATTTCAGCGT
CCTGCCTGGG ACGGCTATCT ACGCGTAAAT GCGTTGCTGG CAGATAAATT ACTGCCGCTG
TTGCAAGACG ATGACATTAT CTGGATCCAC GATTATCACC TGTTGCCATT TGCGCATGAA
TTACGCAAAC GGGGAGTGAA TAATCGCATT GGTTTCTTTC TGCATATTCC TTTCCCGACA
CCGGAAATCT TCAACGCGCT GCCGACATAT GACACCTTGC TTGAACAGCT TTGTGATTAT
GATTTGCTGG GTTTCCAGAC AGAAAACGAT CGTCTGGCGT TCCTGGATTG TCTTTCTAAC
CTGACCCGCG TCACGACACG TAGCGCAAAA AGCCATACAG CCTGGGGCAA AGCATTTCGA
ACAGAAGTCT ACCCGATCGG CATTGAACCG AAAGAAATAG CCAAACAGGC TGCCGGGCCA
CTGCCGCCAA AACTGGCGCA ACTTAAAGCG GAACTGAAAA ACGTACAAAA TATCTTTTCT
GTCGAACGGC TGGATTATTC CAAAGGTTTG CCAGAGCGTT TTCTCGCCTA TGAAGCGTTG
CTGGAAAAAT ATCCGCAGCA TCATGGTAAA ATTCGTTATA CCCAGATTGC ACCAACGTCG
CGTGGTGATG TGCAAGCCTA TCAGGATATT CGTCATCAGC TCGAAAATGA AGCTGGACGA
ATTAATGGTA AATACGGGCA ATTAGGCTGG ACGCCGCTTT ATTATTTGAA TCAGCATTTT
GACCGTAAAT TACTGATGAA AATATTCCGC TACTCTGACG TGGGCTTAGT GACGCCACTG
CGTGACGGGA TGAACCTGGT AGCAAAAGAG TATGTTGCTG CTCAGGACCC AGCCAACCCG
GGCGTTCTTG TTCTTTCGCA ATTTGCGGGA GCGGCAAACG AGTTAACGTC GGCGTTAATT
GTTAACCCCT ACGATCGTGA CGAAGTTGCA GCTGCGCTGG ATCGTGCATT GACTATGTCG
CTGGCGGAAC GTATTTCCCG TCATGCAGAA ATGCTGGACG TTATCGTGAA AAACGATATT
AACCACTGGC AGGAGTGCTT CATTAGCGAC CTAAAGCAGA TAGTTCCGCG AAGCGCGGAA
AGCCAGCAGC GCGATAAAGT TGCTACCTTT CCAAAGCTTG CGTAG
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| Protein sequence | MSRLVVVSNR IAPPDEHAAS AGGLAVGILG ALKAAGGLWF GWSGETGNED QPLKKVKKGN
ITWASFNLSE QDLDEYYNQF SNAVLWPAFH YRLDLVQFQR PAWDGYLRVN ALLADKLLPL
LQDDDIIWIH DYHLLPFAHE LRKRGVNNRI GFFLHIPFPT PEIFNALPTY DTLLEQLCDY
DLLGFQTEND RLAFLDCLSN LTRVTTRSAK SHTAWGKAFR TEVYPIGIEP KEIAKQAAGP
LPPKLAQLKA ELKNVQNIFS VERLDYSKGL PERFLAYEAL LEKYPQHHGK IRYTQIAPTS
RGDVQAYQDI RHQLENEAGR INGKYGQLGW TPLYYLNQHF DRKLLMKIFR YSDVGLVTPL
RDGMNLVAKE YVAAQDPANP GVLVLSQFAG AANELTSALI VNPYDRDEVA AALDRALTMS
LAERISRHAE MLDVIVKNDI NHWQECFISD LKQIVPRSAE SQQRDKVATF PKLA
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