Gene EcSMS35_1271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1271 
SymbolpgsA 
ID6144973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1266699 
End bp1267247 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content52% 
IMG OID641616149 
Productphosphatidylglycerophosphate synthetase 
Protein accessionYP_001743332 
Protein GI170680427 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID[TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.01936e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.00068056 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAATTTA ATATCCCTAC GTTGCTTACA CTGTTCCGTG TCATCCTTAT CCCATTCTTT 
GTATTGGTCT TTTATCTGCC TGTCACCTGG TCGCCGTTTG CCGCCGCGCT CATTTTCTGC
GTCGCGGCGG TGACTGACTG GTTCGATGGT TTTCTGGCAC GCCGCTGGAA CCAGAGTACC
CGGTTTGGTG CTTTCCTTGA CCCTGTGGCA GATAAAGTTC TCGTGGCTAT CGCCATGGTG
CTGGTAACCG AGCATTATCA CAGCTGGTGG GTGACATTAC CGGCGGCAAC GATGATCGCC
CGTGAAATTA TTATTTCTGC GCTACGCGAA TGGATGGCGG AGTTGGGTAA ACGCAGTAGC
GTGGCCGTCT CCTGGATTGG GAAAGTGAAA ACTACGGCCC AGATGGTGGC GTTGGCATGG
CTGCTGTGGC GTCCGAACAT TTGGGTTGAG TACGCCGGTA TTGCACTTTT CTTTGTGGCT
GCGGTACTGA CTCTGTGGTC AATGTTGCAA TATTTGAGCG CTGCGCGTGC AGATTTGCTT
GATCAGTGA
 
Protein sequence
MQFNIPTLLT LFRVILIPFF VLVFYLPVTW SPFAAALIFC VAAVTDWFDG FLARRWNQST 
RFGAFLDPVA DKVLVAIAMV LVTEHYHSWW VTLPAATMIA REIIISALRE WMAELGKRSS
VAVSWIGKVK TTAQMVALAW LLWRPNIWVE YAGIALFFVA AVLTLWSMLQ YLSAARADLL
DQ