Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1225 |
Symbol | |
ID | 6142845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 1228911 |
End bp | 1229831 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641616104 |
Product | hypothetical protein |
Protein accession | YP_001743287 |
Protein GI | 170681707 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00950] Carboxylate/Amino Acid/Amine Transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.157758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.931863 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTCC GCCAGTTGTT ACCGCTTTTT GGCGCGCTGT TTGCGTTGTA TATCATTTGG GGCTCAACCT ATTTTGTCAT TCGGATTGGC GTGGAAAGCT GGCCTCCGTT AATGATGGCA GGCGTTCGAT TCCTGGCAGC CGGTATTTTA TTGATGGCAT TTTTGCTACT GCGCGGACAC AAGCTCCCCC CGCTACGTCC GCTGCTCAAT GCCGCGCTGA TTGGCCTGTT ATTGCTGGCT GTCGGTAATG GCATGGTGAC GGTTGCCGAG CATCAAAATG TTCCTTCCGG CATCGCCGCC GTTGTGGTTG CAACCGTGCC CCTCTTTACC CTGTGCTTCA GCCGCCTGTT TGGCATTAAA ACGCGCAAAC TGGAATGGGT GGGTATCGCC ATTGGGCTTG CCGGAATCAT CATGCTCAAT AGCGGTGGAA ATTTAAGCGG CAATCCGTGG GGCGCGATTC TGATTTTAAT CGGCTCGATT AGCTGGGCGT TTGGCTCGGT TTATGGCTCG CGCATTACCT TACCTGTAGG GATGATGGCG GGTGCTATTG AGATGCTGGC GGCAGGCGTG GTGTTAATGA TCGCGTCGAT GATTGCAGGT GAAAAACTGA CGGCGCTCCC TTCCCTTTCA GGCTTCCTTG CGGTCGGCTA TCTGGCGCTG TTTGGTTCGA TTATCGCCAT CAACGCTTAT ATGTATTTAA TCCGTAATGT CAGTCCGGCT CTCGCCACCA GCTACGCCTA CGTTAACCCG GTGGTCGCGG TCTTGCTGGG TACGGGACTG GGCGGAGAGA CGCTGTCGAA GATTGAATGG CTGGCGCTCG GCGTAATTGT CTTCGCGGTG GTGCTGGTCA CGTTGGGAAA ATATCTCTTT CCGGCAAAAC CCGTAGTTGC GCCAGTTATT CAGGACGCAT CAAGCGAGTA A
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Protein sequence | MRFRQLLPLF GALFALYIIW GSTYFVIRIG VESWPPLMMA GVRFLAAGIL LMAFLLLRGH KLPPLRPLLN AALIGLLLLA VGNGMVTVAE HQNVPSGIAA VVVATVPLFT LCFSRLFGIK TRKLEWVGIA IGLAGIIMLN SGGNLSGNPW GAILILIGSI SWAFGSVYGS RITLPVGMMA GAIEMLAAGV VLMIASMIAG EKLTALPSLS GFLAVGYLAL FGSIIAINAY MYLIRNVSPA LATSYAYVNP VVAVLLGTGL GGETLSKIEW LALGVIVFAV VLVTLGKYLF PAKPVVAPVI QDASSE
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