Gene EcSMS35_1134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1134 
Symbol 
ID6147052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1153644 
End bp1154576 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content50% 
IMG OID641616012 
Producthypothetical protein 
Protein accessionYP_001743204 
Protein GI170681366 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.58795e-08 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value9.68229e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTCGTG TAAATATTTT TTGCTCATTT GCTCTGCTTT TTGCCAGCCA TACTAGCCTG 
GCGGTAACTT ATCCATTACC TCCAGAGGGT AGCCGTTTAG TGGGGCAGTC GTTTACTGTA
ACTGTTCCTG ATCACAATAC CCAGCCGCTG GAGACTTTTG CCGCACAATA CGGGCAAGGG
TTAAGTAACA TGCTGGAAGC GAACCCGGGC GCTGATGTTT TTTTGCCGAA GTCTGGCTCG
CAACTCACCA TTCCGCAGCA ACTGATTTTG CCCGCCACTG TTCGTAAAGG GATTGTGGTT
AACGTCGCTG AGATGCGTCT TTATTACTAC CCACCAGACA GTAATACTGT GGAAGTCTTT
CCTATTGGTA TCGGCCAGGC TGGGCGAGAA ACCCCGCGTA ACTGGGTGAC TACCGTTGAA
CGTAAACAAG AAGCTCCAAC CTGGACGCCA ACGCCGAACA CTCGGCGCGA ATATGCGAAA
CGAGGGGAGA GTTTGCCCGC ATTTGTTCCT GCGGGCCCCG ATAATCCCAT GGGGCTGTAC
GCGATTTATA TTGGCAGGTT GTATGCCATC CATGGTACCA ATGCCAATTT TGGTATTGGG
CTCCGGGTAA GTCAGGGCTG TATTCGTCTG CGCAATGACG ATATCAAATA TCTGTTTGAT
AATGTTCCTG TTGGGACGCG TGTGCAAATT ATCGACCAGC CAGTAAAATA CACCACTGAA
CCAGATGGCT CGAACTGGCT GGAAGTTCAT GAGCCGTTGT CGCGCAATCG TGCAGAATAT
GAGTCTGACC GAAAAGTGCC ATTGCCGGTA ACCCCATCTT TGCGGGCGTT TATCAGCGGG
CAAGAAGTTG ATGTAAATCG CGCAAATGCT GCGTTGCAAC GTCGATCGGG AATGCCTGTG
CAAATTAGTT CTGGTTCAAG ACAGATGTTT TAA
 
Protein sequence
MRRVNIFCSF ALLFASHTSL AVTYPLPPEG SRLVGQSFTV TVPDHNTQPL ETFAAQYGQG 
LSNMLEANPG ADVFLPKSGS QLTIPQQLIL PATVRKGIVV NVAEMRLYYY PPDSNTVEVF
PIGIGQAGRE TPRNWVTTVE RKQEAPTWTP TPNTRREYAK RGESLPAFVP AGPDNPMGLY
AIYIGRLYAI HGTNANFGIG LRVSQGCIRL RNDDIKYLFD NVPVGTRVQI IDQPVKYTTE
PDGSNWLEVH EPLSRNRAEY ESDRKVPLPV TPSLRAFISG QEVDVNRANA ALQRRSGMPV
QISSGSRQMF