Gene EcSMS35_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1118 
SymbolansB 
ID6146805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1135375 
End bp1136421 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content52% 
IMG OID641615998 
ProductL-asparaginase II 
Protein accessionYP_001743190 
Protein GI170680917 
COG category[E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 
TIGRFAM ID[TIGR00520] L-asparaginases, type II 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.881329 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCT ATAAAAGAAC GGCACTTGCC GCACTGGTTA TGGGTTTTAG TGGTGCAGCA 
CTGGCATTAC CCAATATCAC CATTTTAGCA ACCGGCGGGA CCATTGCCGG TGGTGGTGAC
TCCGCAACCA AATCTAACTA CACAGCGGGT AAAGTTGGCG TAGAAAATCT GGTTAATGCG
GTGCCGCAAC TGAAGGACAT TGCGAACGTT AAAGGCGAGC AGGTAGTGAA TATCGGCTCC
CAGGACATGA ACGATAATGT CTGGCTGACA CTGGCGAAAA AAATTAACAC CGACTGCGAT
AAAACCGACG GCTTCGTCAT TACCCACGGT ACCGACACGA TGGAAGAAAC CGCTTACTTC
CTTGACCTGA CGGTGAAATG TGACAAACCG GTGGTGATGG TCGGTGCAAT GCGCCCGTCC
ACGTCCATGA GCGCAGACGG TCCCTTCAAT CTGTATAACG CGGTAGTTAC CGCAGCTGAT
AAAGCCTCCG CTAATCGTGG CGTACTGGTA GTAATGAACG ACACTGTTCT GGATGGCCGT
GACGTCACTA AAACCAACAC CACCAACGTA GCGACCTTCA AGTCTGTTAA CTACGGCCCT
CTGGGTTACA TTCACAACGG TAAGATTGAC TACCAGCGCA CCCCGGCACG TAAGCACACC
AGTGATACGC CGTTCGATGT CTCTAAGCTG AATGAACTGC CGAAAGTCGG CATTGTTTAT
AACTACGCTA ACGCATCCGA TCTTCCGGCT AAAGCACTGG TAGATGCGGG CTATGATGGC
ATCGTTAGCG CTGGTGTGGG TAACGGTAAC CTGTATAAAT CCGTGTTTGA CACCCTGGCG
ACCGCCGCGA AAAACGGCAC TGCGGTAGTG CGTTCTTCCC GCGTACCGAC GGGAGCAACC
ACTCAGGATG CCGAAGTGGA TGATGCGAAA TATGGCTTCG TCGCCTCTGG CACGTTGAAC
CCGCAAAAAG CACGTGTTCT GCTGCAACTG GCTCTGACGC AAACCAAAGA TCCGCAGCAG
ATCCAGCAGA TATTCAATCA GTACTAA
 
Protein sequence
MNFYKRTALA ALVMGFSGAA LALPNITILA TGGTIAGGGD SATKSNYTAG KVGVENLVNA 
VPQLKDIANV KGEQVVNIGS QDMNDNVWLT LAKKINTDCD KTDGFVITHG TDTMEETAYF
LDLTVKCDKP VVMVGAMRPS TSMSADGPFN LYNAVVTAAD KASANRGVLV VMNDTVLDGR
DVTKTNTTNV ATFKSVNYGP LGYIHNGKID YQRTPARKHT SDTPFDVSKL NELPKVGIVY
NYANASDLPA KALVDAGYDG IVSAGVGNGN LYKSVFDTLA TAAKNGTAVV RSSRVPTGAT
TQDAEVDDAK YGFVASGTLN PQKARVLLQL ALTQTKDPQQ IQQIFNQY