| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1074 |
|---|
| Symbol | |
|---|
| ID | 6146034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1088380 |
|---|
| End bp | 1089231 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641615961 |
|---|
| Product | IS150 transposase orfB |
|---|
| Protein accession | YP_001743153 |
|---|
| Protein GI | 170679947 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.274968 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGTAC TCAACGAGCT AAGGCAGTTT TATCCTCTTG ATGAGCTTCT CAGGGCTGCG
GAGATACCGC GCAGTACGTT TTATTACCAT CTAAAGGCTC TCAGCAAGCC TGACAAGTAT
GCGGACGTTA AAAAGCGTAT TGGTGAGATT TATCACGAGA ATAGAGGCCG ATACGGATAC
CGTAGGGTAA CGCTGTCTCT TCATCGAGAA GGGAAACAGA TTAACCATAA AGCTGTTCAG
CGCCTGATGG GAACCCTCTC ACTTAAAGCA GCGATTAAGG TCAAGCGATA CCGCTCTTAC
AGAGGAGAGG TAGGGCAAAC CGCCCCTAAT GTTCTCCAAA GAGATTTCAA GGCTACGCGG
CCAAACGAGA AGTGGGTTAC CGATGTTACT GAATTTGCAG TCAATGGGCG CAAGCTGTAT
TTGTCTCCAG TAATAGATCT CTTCAACAAC GAAGTTATTT CTTACAGCCT TTCGGAAAGA
CCAGTGATGA ACATGGTTGA GAATATGCTC GATCAGGCAT TCAAAAAGCT TAATCCTCAC
GAGCATCCTG TTCTGCACTC TGACCAGGGA TGGCAGTATC GTATGAGAAA ATATCAAAAT
ATTCTTAAAG AACATGGTAT TAAACAAAGC ATGTCCAGAA AAGGCAATTG TCTGGATAAT
GCTGTGGTGG AGTGTTTCTT TGGAACCTTA AAGTCGGAGT GTTTTTATCT TGATGAGTTC
AGTAATATAA GCGAACTGAA GGATGCTGTT ACGGAATATA TTGAATACTA CAACAGCAGA
AGAATTAGCC TGAAATTAAA AAGTCTGACT CCAATTGAAT ATCGGAATCA GACCTATATG
CCTCGTGTTT AA
|
|---|
| Protein sequence | MKVLNELRQF YPLDELLRAA EIPRSTFYYH LKALSKPDKY ADVKKRIGEI YHENRGRYGY
RRVTLSLHRE GKQINHKAVQ RLMGTLSLKA AIKVKRYRSY RGEVGQTAPN VLQRDFKATR
PNEKWVTDVT EFAVNGRKLY LSPVIDLFNN EVISYSLSER PVMNMVENML DQAFKKLNPH
EHPVLHSDQG WQYRMRKYQN ILKEHGIKQS MSRKGNCLDN AVVECFFGTL KSECFYLDEF
SNISELKDAV TEYIEYYNSR RISLKLKSLT PIEYRNQTYM PRV
|
|---|
| |