| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1039 |
|---|
| Symbol | hisC |
|---|
| ID | 6142706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 1059632 |
|---|
| End bp | 1060702 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641615926 |
|---|
| Product | histidinol-phosphate aminotransferase |
|---|
| Protein accession | YP_001743118 |
|---|
| Protein GI | 170683323 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.191971 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG TGACTATTAC CGATTTAGCG CGTGAGAACG TCCGCAACCT GACGCCGTAT
CAGTCGGCGC GTCGTCTGGG CGGTAACGGC GACGTCTGGC TGAACGCCAA CGAATACCCC
ACAGCCGTGG AGTTTCAGCT TACTCAGCAA ACGCTCAACC GCTACCCGGA ATGCCAGCCG
AAAGCGGTGA TTGAAAATTA CGCGCAGTAT GCAGGCGTGA AGGCGGAGCA GGTGCTGGTC
AGCCGTGGCG CGGACGAAGG TATTGAACTG CTGATTCGCG CTTTTTGCGA ACCGGGTAAA
GACGCCATCC TCTACTGCCC GCCAACGTAC GGCATGTACA GCGTCAGCGC CGAAACCATT
GGCGTCGAGT GCCGCACAGT GCCGACGCTG AAAAACTGGC AACTGGACTT GCAGGGCATT
TCCGACAAGC TGGACGGCGT AAAAGTGGTT TATGTTTGCA GCCCCAACAA CCCGACCGGG
CAACTGATCA ATCCACAGGA TTTTCGCACC CTGCTGGAGT TAACGCGCGG TAAAGCGATT
GTGGTTGCCG ATGAGGCCTA TATCGAGTTT TGCCCGCAGG CATCGCTGGC TGGCTGGCTG
GCGGAATATC CGCACCTGGC TATTTTGCGC ACACTGTCGA AAGCCTTCGC TCTGGCGGGC
CTTCGTTGCG GATTTACGCT GGCAAACGAA GAAGTCATCA ACCTGCTGAT GAAAGTGATC
GCCCCCTACC CGCTCTCGAC GCCGGTTGCC GACATTGCAG CCCAGGCGTT AAGCCCGCAG
GGGATCGTCG CCATGCGCGA ACGAGTGGCG CAAATTATTG CTGAACGCGA ATACCTGATG
GCCGCACTGA AAGAGATCCC CTGCGTGGAG CAGGTTTTCG ACTCCGAAAC CAACTACATT
CTGGCGCGCT TTAAAGCCTC CAGCGCAGTG TTTAAATCTT TGTGGGATCA GGGCATTATC
TTACGTGATC AGAATAAACA ACCCTCTTTA AGCGGCTGCC TGCGAATTAC CGTCGGAACC
CGTGAAGAAA GCCAGCGCGT CATTGACGCC TTACGTGCGG AGCAAGTTTG A
|
|---|
| Protein sequence | MSTVTITDLA RENVRNLTPY QSARRLGGNG DVWLNANEYP TAVEFQLTQQ TLNRYPECQP
KAVIENYAQY AGVKAEQVLV SRGADEGIEL LIRAFCEPGK DAILYCPPTY GMYSVSAETI
GVECRTVPTL KNWQLDLQGI SDKLDGVKVV YVCSPNNPTG QLINPQDFRT LLELTRGKAI
VVADEAYIEF CPQASLAGWL AEYPHLAILR TLSKAFALAG LRCGFTLANE EVINLLMKVI
APYPLSTPVA DIAAQALSPQ GIVAMRERVA QIIAEREYLM AALKEIPCVE QVFDSETNYI
LARFKASSAV FKSLWDQGII LRDQNKQPSL SGCLRITVGT REESQRVIDA LRAEQV
|
|---|
| |